| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1818 |
|---|
| Symbol | |
|---|
| ID | 4539064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 1766401 |
|---|
| End bp | 1767360 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639747163 |
|---|
| Product | RNA pseudouridine synthase |
|---|
| Protein accession | YP_892925 |
|---|
| Protein GI | 118474442 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATA AAAAGTTTAA ATTAGGATAT TTTTTGGGCG AAAAAGCTTA CCGTATTTTT
TTAAATTTAG GTTATAGTAT GAAAGAAGCT CAAAAGCTTT GTGACAAAGG TAGATTGCTC
GTAAATGACG CTGTTTGCGG TAAAAACGAT CCGGTTTTCG GGGAAGCTTA TTTTATAGAT
TACGAGTGTG AGCCAAAGGG ATTAAAACCT ATATTTGAAT GTGACGAGTT TGGTGTATTT
GATAAACCAA GCGGAGTTTT ATCTCATCCA AATGGTAGAA ATTGCGAGTA TAGTTTATGT
GATGAAATTT GGTCTTTGTG GGGCAAAAAA GCTTGTGTTG CCCATAGACT TGACCGAGAA
ACAAGCGGAG TTATCGTTGT GGCTAAAAAT GCGAATTCCG CGTTAAATTT AAAAAAATCT
TTTGAAAATA GGGCAGTAGC AAAAACTTAT CTGGCTTTTG TGAGAGGCAA ATTTGACGGT
AATGGACTTG ATAAATTTCA TATAAATGAC TTTGAGGATT TTAAAGATAA GCTAGAATTT
TTTGATAATA TCCAAGGTTT TGTTATCGAT AAAAATATGG ATATAACAAA AGATTATGAT
GACATAAAAA TCAGAATGGA AATTTGTCCG GAAGGAAAGA GAGCTGTGAC CGTAGTAAAA
CTCGTAGAGT ATTATCCTAA ATTTGATATC AGCTTGGTTG AGTGTTATCC ACTCACCGGA
AGACAACATC AGATTCGCTT ACATTTGTTT CATATGAAAC ATAGAATTTT GGGTGATCCG
ATTTACGGCT TAGATAAATT TAATGTAGAG CAAATTTTAG ATGGTGTGAT GAGCGAGCGC
GATAGGGTAA AAAATACTGG AGCATCAAGG CTAATGCTCC ACGCAAAATC AGTTAAATTT
AAATTTAAAG ATCAAGTATT TGAGATAAGA TCAGAACAAG ATTTTAATTT TAATAAATAA
|
|---|
| Protein sequence | MAYKKFKLGY FLGEKAYRIF LNLGYSMKEA QKLCDKGRLL VNDAVCGKND PVFGEAYFID
YECEPKGLKP IFECDEFGVF DKPSGVLSHP NGRNCEYSLC DEIWSLWGKK ACVAHRLDRE
TSGVIVVAKN ANSALNLKKS FENRAVAKTY LAFVRGKFDG NGLDKFHIND FEDFKDKLEF
FDNIQGFVID KNMDITKDYD DIKIRMEICP EGKRAVTVVK LVEYYPKFDI SLVECYPLTG
RQHQIRLHLF HMKHRILGDP IYGLDKFNVE QILDGVMSER DRVKNTGASR LMLHAKSVKF
KFKDQVFEIR SEQDFNFNK
|
|---|
| |