| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1234 |
|---|
| Symbol | |
|---|
| ID | 4538552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 1216674 |
|---|
| End bp | 1217282 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639746604 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_892391 |
|---|
| Protein GI | 118474330 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 76 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCAAT TATATGTTTT AACTGACAAA GAACTCACTC CGCAAAACAG TATCTCCCAA
CAAATTTTAG AGCTCTTAAA TTCAGGTATC AAGTTAATTC AATACAGAAA CAAAACACAA
GATCACGATA TAAAATTACT CAAATCCATA GCTAATTTAT GCGATGATTT TAACGCAAAG
TTTATCATAA ACGATGATCC GTTTCTAGCA AAAGCTTGCG GTGCGCACGG TGTTCATATC
GGAAAAGACG ATGAAGATAT AAAAAAAGCA AAAGAGCTAC TAGGTAAAAA CTCCATTATA
GGAGTTAGTT GTTACAATGA CATAAATTTA GCGCTAAAAG CCCAAAAAGA TGGTGCTTCT
TACGTTGCTT TTGGAGCGAT GTATCCAAGC CAAACAAAGC CAAACGCTCC TCTTTGCGAC
CATAATACTA TAAAAAAAGC AAAAGAGAAT TTAAACGTTC CTATCTGTGT CATAGGTGGA
ATAAATGCTC TAAATTTAAA AGAAGCTAGT GCTCTTATGC CTGATCTAAT AGCTATAGTA
AGTGCCGCTT ACTCTCCAAA AAGTATCAGT GAAAACATAA CAAATTTAAA CAATATAATA
AGGAATTAA
|
|---|
| Protein sequence | MCQLYVLTDK ELTPQNSISQ QILELLNSGI KLIQYRNKTQ DHDIKLLKSI ANLCDDFNAK
FIINDDPFLA KACGAHGVHI GKDDEDIKKA KELLGKNSII GVSCYNDINL ALKAQKDGAS
YVAFGAMYPS QTKPNAPLCD HNTIKKAKEN LNVPICVIGG INALNLKEAS ALMPDLIAIV
SAAYSPKSIS ENITNLNNII RN
|
|---|
| |