Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1206 |
Symbol | |
ID | 4537902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1186175 |
End bp | 1188241 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639746576 |
Product | putative TonB-dependent receptor |
Protein accession | YP_892364 |
Protein GI | 118474089 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAA AGATTACTAT TTTACTATCT TTAGTTTTAG CAAGCAGTTT ATATGCCTGT ACAAAGCTTG ATGATGTCAT AGTAAGTGCA AATAGAAGTG CACAAAAACT TGATGATATA AGCAAAAGCG TATCTGTTAT AGACGGCGAT ACGATAAAGC GCAGACAAAG CACGAATTTA ACCGGCATTA TAGCCGATGA GCCGGGAATT TCTTATGCTC CTGATGGAAT GAGCTCGGGA CAGATTATTT TAAGAGGATT TAGTACTCAG AACTTTAGAG CACCTCTTTT TGTAGACGGT AATAGGTTTA GAGGTAGAAA TACTCTTGAG TATATGCTTT TTGATCCAAA CCAGATAGAG CGAATAGAGA TAATAAGAGG TCCTGCTTCA TCTTTGTATG GTACGGATTC TTTTGGAGGC GTGGTAAATG TTATAACAAA AAGAGCTACT GGAGATGTTC AAGCTCCATT TAATATAACA GATACTTATA TAAGCAGTGA ATATCAAAGC GTAAATCATG CGATTGCAAA TAGATTTCAG CTTGGAGGAG TTGGAGACGG ATTTGATATT TTGTTAGGTA TAAACTACAA AGACGGAGAT AATTACGGCA CGAAAGAGGG CGTAATACCA AACTCGGACT ATCTTTATAG AGGCTTTGAT CTAAAAGTCG GTTATAGTTT TTTAGATACG AATAGAGTAG AACTTACGGC TAGATATACT AAAGTAAATC GAGGTAGAGC TGCAGGACAA TTTGCATCTC CTGGAGCCGG AAATGCACCC GGTGTTTTGC AAAGACAGAT GAGAGAAGAG CCTATGAGGG AAAAATATTT AGCTTTGGGA TATAGTGCGC AGATGCAAAA CGGTAGTTTA GAAGCTAGTC TTTATAGAAG AGAGCTTTAT ACTCATATAA ACGTAATTCC AAATTTAAAC TCGCCGCAAA AATGGGTTGA TAATTATGTT ATTGGACCAG TTGTATATGG CGGTAAAAGT ATAGTTGCTT ATAGCGGTGA GTCTTTGTCT CAGACATATG GAATAGACTG GTATTATGAG AGTAGAGACG GTAGCGAGCA GAGCGTAAAC GGTAAAAATA GAATAAAAAG TGCGCCAAAT TCTACTCAAC TAAATATCGG AGTGTTTGGG CTATTGGAGT ATGGATTTGA AGGAGGAACT TTGCTGAGCG CTAGTCTTAG GCATGATTAT TTTAAGACCG GACTTGAAAC AAGTTTTATC AAAAATAACG AGATAAAAAA ATTGTTTGAA AGTGCCGGAG ATACGTCTAC AAACAAAACT ACTAGCGGTT TTGGTATGAT ATATCCTTTA TTTGGAGGTT TGGATTTTGT TTTAAATATA AACTCATCTT TTAGGGCGCC ATCAGTCACG GAGATAACGG CTGTTGGTGA TGGAGTGAGC GGCGTATTTA CTCTTCCAAA TAGTAGTATA AAACCAGAAA CCGGATTAAG TTATGAAACC GGATTAAAGT ATAAAGACGG TTTGATAATT TCAAATTTAA CAGCATTCAC AAGCAGTTAT AAAAATTTAA TAGTTACGAG AAATATAACA TATAAAAATA CTCCCGCAAG GCAGCTGCAA AACGTAGGAG AATCTAGCAT AAGCGGAATT GAGTTTGATA TAGCTTATAA ATTGCTTTCA AATTTGATTT TTAAAACAAA TGCAAGTTAT CTTTACGGCG AGGATAAAAC GTCTCATAAA CCATTGCCCC AGATAATGCC TTTAAATGGT TTTATCAGTC TAATGTATGA GCCAAAATCT ATAAAAAAAT CATATATAGA ATATACTACT CAATGGGCGT CAAATAAGAC AAGAACGGAT AATTTGAGTG AGCGAGAACG AAGCGGTTAC GCGGTTTCAA ATTTATATTT TGGAAAAGAA TTCGGAAATA TGGGCGCTTT TAAGAGTGTG GAGTTGAATT TCGGCATTGA AAATATATTT TATAAAAAAT ATTCTATGCC ATCAGTGCCC GAGGATATTA GATATCCCGT GAGCAAGACA AATCCGCTTT TAAATCCAGG TAGAAATTTT AAAATAGGCT TAAGAGCTAG TTTTTAG
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Protein sequence | MYKKITILLS LVLASSLYAC TKLDDVIVSA NRSAQKLDDI SKSVSVIDGD TIKRRQSTNL TGIIADEPGI SYAPDGMSSG QIILRGFSTQ NFRAPLFVDG NRFRGRNTLE YMLFDPNQIE RIEIIRGPAS SLYGTDSFGG VVNVITKRAT GDVQAPFNIT DTYISSEYQS VNHAIANRFQ LGGVGDGFDI LLGINYKDGD NYGTKEGVIP NSDYLYRGFD LKVGYSFLDT NRVELTARYT KVNRGRAAGQ FASPGAGNAP GVLQRQMREE PMREKYLALG YSAQMQNGSL EASLYRRELY THINVIPNLN SPQKWVDNYV IGPVVYGGKS IVAYSGESLS QTYGIDWYYE SRDGSEQSVN GKNRIKSAPN STQLNIGVFG LLEYGFEGGT LLSASLRHDY FKTGLETSFI KNNEIKKLFE SAGDTSTNKT TSGFGMIYPL FGGLDFVLNI NSSFRAPSVT EITAVGDGVS GVFTLPNSSI KPETGLSYET GLKYKDGLII SNLTAFTSSY KNLIVTRNIT YKNTPARQLQ NVGESSISGI EFDIAYKLLS NLIFKTNASY LYGEDKTSHK PLPQIMPLNG FISLMYEPKS IKKSYIEYTT QWASNKTRTD NLSERERSGY AVSNLYFGKE FGNMGAFKSV ELNFGIENIF YKKYSMPSVP EDIRYPVSKT NPLLNPGRNF KIGLRASF
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