| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1050 |
|---|
| Symbol | |
|---|
| ID | 4538445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 1049160 |
|---|
| End bp | 1050416 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639746425 |
|---|
| Product | putative protease |
|---|
| Protein accession | YP_892214 |
|---|
| Protein GI | 118475566 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.861242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAC CCGAGCTTCT GAGTCCTGCT GGAAATTTAA CAAAATTAAA AATAGCATTA
AATTACGGTG CAGACGCTGT ATATGCTAGT GTAGGCAGCT TTTCTTTACG CCAAAGAAGT
GCAAAAGAAT TTAATTTAGA AAGCTTTGAA GAGGGCGTGA GACTAGCTCA TAAGCATAAT
GCTAAATTTT ACGCTACTAT AAATGGATTT CCTTTTAACG GTCAAATAGA ACCGTTAAAA
AGACATATAA AAACGGTGTC TAGTTTTGGT GTAGATGCAT TTATCATAGC AACTCCGGGA
GTTATGAGTT TAGCTAAAGA GATAGCTCCT GATATCGAAG TTCATTTATC AACTCAAGCA
AATGTTATGA ACTATCTTGA TGCTTCTATC TATCATCAGA TGGGCGCTAG TCGTATAGTA
GCCGCGCGTG AAATGAGCTT AAAAGACGCA GTTTTAATAA AAGAAAAAAT TCCTAGTCTT
GAAATAGAAA TTTTTTGTCA CGGCTCTATG TGTTTTGCAT ACTCTGGACG TTGTTTGATA
TCTGCTGTGC AAAGCGGACG TTTTAGTAAC CGCGGAAGTT GTGCGAATGA CTGTAGGTTC
AAGTATGAAT TGTATGCTAA AAGTGAAGAT AACGGAGCTT TATTTAGATT GGAAGAAGAC
GAGAGTGGAA CTCATATAAT GAACTCAAAA GATCTAAATT TAGCCGTTCA TATAGAAAAG
ATTATAAAAA CCGGAGCGAT CGATAGCTTA AAGATAGAAG GTCGCACAAA AAGTGAGTAT
TACGCTGCTT GTACGACAAG AGCTTACAGA ATGGCTATCG ATGATGCGAT AAACGGTAAA
TTCGAACCAT CTGTATATGA AGCCGAGCTC AATACATTAA AAAATCGCGG ATTTAGCGAT
GGATATTTGA TACATAAACC TTATGAGAGA TCAAATACTC AAAATCATAT TTCTAGCATA
GAAGAGGGCA CTCATCAAGT TCATGCTATA AGTGAAGACG GCGAGTATTT TAAAACCAAA
TTTAAAATAT CACCAAATGA AGCTTATGAG ATAATGGCAC CGATTGGGTC AGATATAAAT
TTAGGTCAAA ATGAGCTTGG AATGGTTTAT GAAAATGGTG GTAAGTATTT TGTGGAATTT
ACAAAACTCA TTAGTAAAAA GGGTAAAGAA TTTGACGAGA TCCATAGCGG TAATGAAAAT
GAGATAAAAC TTCCGTTTAA GCTACCTGAG TTTAGTTTTT TGCGAAAAGA GATCTAA
|
|---|
| Protein sequence | MKKPELLSPA GNLTKLKIAL NYGADAVYAS VGSFSLRQRS AKEFNLESFE EGVRLAHKHN
AKFYATINGF PFNGQIEPLK RHIKTVSSFG VDAFIIATPG VMSLAKEIAP DIEVHLSTQA
NVMNYLDASI YHQMGASRIV AAREMSLKDA VLIKEKIPSL EIEIFCHGSM CFAYSGRCLI
SAVQSGRFSN RGSCANDCRF KYELYAKSED NGALFRLEED ESGTHIMNSK DLNLAVHIEK
IIKTGAIDSL KIEGRTKSEY YAACTTRAYR MAIDDAINGK FEPSVYEAEL NTLKNRGFSD
GYLIHKPYER SNTQNHISSI EEGTHQVHAI SEDGEYFKTK FKISPNEAYE IMAPIGSDIN
LGQNELGMVY ENGGKYFVEF TKLISKKGKE FDEIHSGNEN EIKLPFKLPE FSFLRKEI
|
|---|
| |