| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0683 |
|---|
| Symbol | |
|---|
| ID | 4538673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 686898 |
|---|
| End bp | 689741 |
|---|
| Gene Length | 2844 bp |
|---|
| Protein Length | 947 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639746069 |
|---|
| Product | flagellar hook-associated protein |
|---|
| Protein accession | YP_891858 |
|---|
| Protein GI | 118475640 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTA CAAATCAGCT TATAAACTTC AATAATCTTT CTAACTATCA AGCAAGCGCA
AAAAGCATTT ATGATATAAA CCAAAGATAT GATAGTGGAT TAAAAATTCA AAATTCATAC
GATAATAGCA GTATTTACGT AGATGGAACC AGACTTGAAT ATGAGATAAA TTTACTTGAT
CAAGTAAAGC AAACTAGCAC AAAAGCTACT GAATTTTCTA AAAACTCTGA TAAGGCTCTA
AATGATTTTG TTTCTAAACT AACTGAGTTT AAAACCAAAC TTATACAAGC AGGTAACGAT
ATACATAATG AAACCTCAAG AAATGCGATT GCTAATGACC TAGAAGGTTT AAAAAAACAT
CTTATAGATA TAGCAAATAG CTCTATAAAC GGCCAGTTTC TGTTTTCTGG AACCGCTCTT
GATACAAAAC CTATCGATAG CGCCGGAAAC TATCACGGTA ACAATCAGTT GATAAATGCA
GCCATAGGAG CCAACCAAAC TACTGCTTAT AATATAGATG GACAGACTCT ATTTTTAGGT
AAGGATAACG ATTATAAAAA GATACTTACT ACAAATGTTA GTTTGATAGA TAATAAAACA
AAATTAACTA GCGATGCAAC AAATTATCTT AATGCTGCAA ATAAGATATT GGATTTAATA
GGTGGAAATT ATCGTTCAGA AGAGCTGGTC GCACAAATAG GCAAAATGAA TCCGGAGCTT
GATTTTGCTG ATCCTGCTGC GCTAGCCGAT ACTACGTTTT ATATGCAAGG CAGAAAGCCT
AACGGCGAAA CTTTTAGTAC CAAATTTAAA GTTACTGCAG ATTCTAGTAT TCAAAATTTA
TTAGATAATA TAGGATACGC GCTCGGTAAT GATAAAAACG GTAAAAACAA CGTTGTTAGC
GTTGCTATAA ATAACAGTGG TCAAATAGAA GTAACTGATC TTAAAAGTGG AAATCAAATG
ACCGAACTTC ATCTATTTGG GCTTACCGAC GTGCGAGGAC CAGAGACTTT TAAAGTCGGC
GATAGAGATA TAGTCATTGA TCCTGCTACT CATACGGATT TTAGAGTCAC TACAGAAAAA
AGAACCGTTG GCGGCGTTTC TACCGATGTT TTGATCGTAG ATAGTGTAAA TCCAGCCGGA
AACAAATATG AGATAACACA AGTCGCAGGC GGAGATTTGT CTATTCAACA AGTCGATAAA
ACTACCGGAG CAAATATAGG AGCCGCTACA AATGTAACTC CTGTGGCCGG AAAACTTGTT
TTAAATCCTG CTGATTTAAC CGGAGGTATA ACCGCAGCTG ATTTTAGAGC TTATGATCCA
GCGAATATAG AAGCATTGTC AGATAGAGGC GCTAGAGATG AAAATGGCAA CTGGGTTTCT
TCGGCAAATT TAACGGATAC TAAAACAATT ACCCAAAATG TTGAGAAGGG AAATGTATAT
TTAACTGAAT TTATAAAAAG CGGCTTTGAA GACGTATTAG GAAATAAAAG CGACGCCATA
GACTACAATA AACTTCAATT TGAAAAAACA GACAATAAAT TATCAAGCAA CGTCTCTCAA
GTAATAAAAG GCACAAATGA GTATGCTACA AACTCTACAA AGCTAAGTGC CGTTGCCGGT
CAAGCTTTGC AAGCTAATCC AAATAGCAAT ATAACTATGA ATATAAAGTC AAAAGACGGA
ACAAATTATG AAGTAAAACT AAATTTTACA GATACAAACT CGAATACTAC CGAAAGATAT
CCTACTATCA CAGTAACTCC GCTAGACGAT AACTGGGAGA AGCCAGCTAC TGCTACTCCT
GTATATTATG GAAATGTATA TTCTGGTAAA TATAACGAAG CCACAAAAAC TACCGATGGA
GTTATAACTC CGGCTGATGA TATGACTTAT CAACAATTAA ATGATATAGT ATCTATGGTA
GCAGCTGGAA ATCTTCCAAG CGGACAACCA AATACTAATG TTATTGCAAA CATTGATACG
GCTTCTAGAA ATACGTATGC CGATGCAAAT GCTTTGAAAA CAGCTTTAAA AAACGGTGTT
ACCGATGTTC AAGCTCAAGG AATTATAGAT AGAGTAGTAG ATGCTTCTGG TATCGCTTAT
CCTATAGATT TTACTGCTAA TGGCAACGCT CTAAGAGATA TAAAAGACGC TATATTAGGC
GATCAAGACT ACGTTACATC AAGATATAAT GAGTACAATA CTGCTATTAA AAGTGCAAGC
AGTACGATAA ATACTACTTT GGATTATCGT GGGAATATGG TTGTTACAGA TAAAACAGCT
TCAAAAACAG ATATAGAAGT TACTCTTTTT GAAGACCGAG GCAGAGGAAA TATTGAATTT
ACCGATATGT ATAAAAGAGA CGCAGCCGGA AATATAGAAT TAGATGCTGC AGGAAATAGA
ATAATAGATA CCTATCAATC AACCACCGGT TCGTTATTTA GTTTTACTTC AAATAATGCT
ATTGCTATAG ATGAGCCAAG TGTTGATATA TTTAAAGATT TAGATGATAT GATACAATCT
GTTAGAGATG GCAGTTATAG AGGAGATCCA GATGCTAGTG ATCCTCGAAC TACCGGTATC
CAAGGTGCTT TGAAAAAAAT AGATCACTTG ATGGATCACA TAAATAAACA ACACACCCAA
ATCGGTTCGT ATACAAACTC TTTAACGGCT ACTGGTGATC GCGCTACTAT CCTTAAAGTC
AATGTATCTT CTGTAAAGTC TGAGATAATG GAAGCAGATA TCGGAGAGAC GTATCTTATG
TTTCAGCAAA GACTTATGGC GTATCAAGCT ATGCTCCAAG CTACTGCAAA AACAAGTCAG
ATAAGTCTGT TAAACTATAT ATAA
|
|---|
| Protein sequence | MRITNQLINF NNLSNYQASA KSIYDINQRY DSGLKIQNSY DNSSIYVDGT RLEYEINLLD
QVKQTSTKAT EFSKNSDKAL NDFVSKLTEF KTKLIQAGND IHNETSRNAI ANDLEGLKKH
LIDIANSSIN GQFLFSGTAL DTKPIDSAGN YHGNNQLINA AIGANQTTAY NIDGQTLFLG
KDNDYKKILT TNVSLIDNKT KLTSDATNYL NAANKILDLI GGNYRSEELV AQIGKMNPEL
DFADPAALAD TTFYMQGRKP NGETFSTKFK VTADSSIQNL LDNIGYALGN DKNGKNNVVS
VAINNSGQIE VTDLKSGNQM TELHLFGLTD VRGPETFKVG DRDIVIDPAT HTDFRVTTEK
RTVGGVSTDV LIVDSVNPAG NKYEITQVAG GDLSIQQVDK TTGANIGAAT NVTPVAGKLV
LNPADLTGGI TAADFRAYDP ANIEALSDRG ARDENGNWVS SANLTDTKTI TQNVEKGNVY
LTEFIKSGFE DVLGNKSDAI DYNKLQFEKT DNKLSSNVSQ VIKGTNEYAT NSTKLSAVAG
QALQANPNSN ITMNIKSKDG TNYEVKLNFT DTNSNTTERY PTITVTPLDD NWEKPATATP
VYYGNVYSGK YNEATKTTDG VITPADDMTY QQLNDIVSMV AAGNLPSGQP NTNVIANIDT
ASRNTYADAN ALKTALKNGV TDVQAQGIID RVVDASGIAY PIDFTANGNA LRDIKDAILG
DQDYVTSRYN EYNTAIKSAS STINTTLDYR GNMVVTDKTA SKTDIEVTLF EDRGRGNIEF
TDMYKRDAAG NIELDAAGNR IIDTYQSTTG SLFSFTSNNA IAIDEPSVDI FKDLDDMIQS
VRDGSYRGDP DASDPRTTGI QGALKKIDHL MDHINKQHTQ IGSYTNSLTA TGDRATILKV
NVSSVKSEIM EADIGETYLM FQQRLMAYQA MLQATAKTSQ ISLLNYI
|
|---|
| |