Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0259 |
Symbol | |
ID | 4539127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 232870 |
End bp | 233853 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639745656 |
Product | secretion protein HlyD |
Protein accession | YP_891463 |
Protein GI | 118475276 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.689376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAGC TTGGAGTTAT CGGTGTTGTT CTGGTTTTGA TATTTTTATT TTATAAATTC TATGAAAAAG AGTTTATACT AAAAGATAAG GACGATATTT TTTACGGAAA TGTTGATACA AAAACAGTCG ATCTCTCTTT TAGATTTTTA GGCGAAATAG TAGATATCTC GAAAATCGAA GGTGCTAAGG TTTCAAAAGG TGAACCCTTG GTATATCTTG ATGACTCATA TCTTCAAAAC TCTCTAAATA GCTTAAAATC AAAGATAAAC ATAGAAAATA TAAATCTTTT AAAACTAGAA TCTGGTTATA GGATAGAGGA GATAAAGCAG AGTAAAGCCA GACTTGAGGC TGCTGCTGCA AATTTAAAAG AGACACAAAA CTCATTTAAT AGACAACAAA AACTTATGCT ATCAAAAGCA ACTTCCGAAG AGGCGTTTAT GACTGCTCAA ACACGCTTTG AAGCCGCTAA AGCAAATTTA AATCTTGCTC AAGCTAATTA CGAACTTCTT AAAAACGGAT ATCAAAAAGA GGATATCGAA GCTCAAAGAG AGATTGTAAG ATATTTAAAT ATTAATCTTG AAGCTATAGA GCTTGATATA AAAAATTCGG TTTTAATCTC TCCGTATGAT GGAATTTTGC AAAAAAGATA TAAAGAAATA GGTGCTATAA CAAACGCAAA TGAGCCAGTA GTCGAGATCG CTAGAGATGA TAAATACTTC ATAAGAGCTT ATATAGATGA GAAAAATCTT GGTAAGATAA AACTCGAACA AAAGATGAAA ATTTTTAGCG ATGCAAGAAG CGAGCCGTAT CTTGGCTATA TAAATTTTAT CTCATCTGTG GCTGAATTTA CTCCTAAGAA CATTCAAACT ACGGAGCTAA GATCAGATCT TGTTTATAAA TTTGAAGTTA CGTTGATAGA TAAAGATGAT CGACTAAAGC AAGGTATGCC AGTGCATATC AAATTCAATG ATCAAAGCAA CTAA
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Protein sequence | MKKLGVIGVV LVLIFLFYKF YEKEFILKDK DDIFYGNVDT KTVDLSFRFL GEIVDISKIE GAKVSKGEPL VYLDDSYLQN SLNSLKSKIN IENINLLKLE SGYRIEEIKQ SKARLEAAAA NLKETQNSFN RQQKLMLSKA TSEEAFMTAQ TRFEAAKANL NLAQANYELL KNGYQKEDIE AQREIVRYLN INLEAIELDI KNSVLISPYD GILQKRYKEI GAITNANEPV VEIARDDKYF IRAYIDEKNL GKIKLEQKMK IFSDARSEPY LGYINFISSV AEFTPKNIQT TELRSDLVYK FEVTLIDKDD RLKQGMPVHI KFNDQSN
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