Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0247 |
Symbol | |
ID | 4538759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 221631 |
End bp | 222551 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639745644 |
Product | tRNA-dihydrouridine synthase B |
Protein accession | YP_891451 |
Protein GI | 118475725 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.244881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGATT TTAGTTCAAA ACCACTATTT CTAGCGCCTT TGGCAGGTTT TTCAGACCTG CCTCTTAGGG GAATTGTAAA AAAATTTGGC TGCGATGTTA CAATAAGCGA AATGATAAGC TCAAACGCTT TGGTATATGA GAATACCAAA ACAGTTTCAA TGATAGAAAA AAATCCTTTA GAAACACCAT ATATAGTGCA ATTAGCCGGA AACGGTTCTG AAATTATCAA ACAAGCAGTT CAAATTTTAA ATGATATTGA AGGAATCGAT GGAATCGATT TAAACTGCGG TTGCCCTGTT CCAAAAGTAG TAAAACAAAA TTCGGGATCC GCTCTGCTAA ATGATATAAA AACGCTATGT GAAATAGTAG AAACTATTAA AAAAACATCT AATAAGCACT ATACTTCAGT TAAAATACGT CTAGGATTTA ATAGTAAAAC CGCACACAAT ATAGCAAAAG ATATAGAAAA CGCTGGTGCT GATTTCATAT GCGTTCACGG TAGAACAAGA GCCGGTGGAT ACAGTGCTAA GGTCGATTAT GAAGCTATAG GTTTAGTAAA GCAAAGCGTG TCGATACCAG TAATTGCAAA CGGCGATATA AATGCAAAAA ACGCAGATGA AATACTGCGC CTTACTAACT GCGACGGGGT CATGATAGGA AGAGCAAGTA TAGGAAATCC TTGGATATTT TATGAAATAA AACATAAAAA GCCAGTAGAT AAAAATATTA AAAAACAGAT TGTTTTAGAG CATTTTAACG AAATGCTGAA TTATTATGGC GAACACGGCA TAGGAATATT TAGAAAACAC CTGCATGAAT ACTCAAAAGG TATAGATGGA GCAAGTTCAT TTAGAAATGA GATAAATCAT ATCTCAGATC CGGATGATAT GCTAAAAATA TTGCGGTCAT TTTTCAAGTA A
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Protein sequence | MIDFSSKPLF LAPLAGFSDL PLRGIVKKFG CDVTISEMIS SNALVYENTK TVSMIEKNPL ETPYIVQLAG NGSEIIKQAV QILNDIEGID GIDLNCGCPV PKVVKQNSGS ALLNDIKTLC EIVETIKKTS NKHYTSVKIR LGFNSKTAHN IAKDIENAGA DFICVHGRTR AGGYSAKVDY EAIGLVKQSV SIPVIANGDI NAKNADEILR LTNCDGVMIG RASIGNPWIF YEIKHKKPVD KNIKKQIVLE HFNEMLNYYG EHGIGIFRKH LHEYSKGIDG ASSFRNEINH ISDPDDMLKI LRSFFK
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