Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1322 |
Symbol | |
ID | 5407598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 306811 |
End bp | 307743 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640871758 |
Product | nickel transport system permease protein NikB |
Protein accession | YP_001407594 |
Protein GI | 154174473 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00196564 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCT ATATCTTTAG ACGGACTGCC TATATCGTGC CGATGCTCTT GGTGGTGTCG GTTTTTATAT TTTTGATACT TCGTCTAAAC GGTACTGACG CGGCGATGAG CTATCTAAAC GCTTCTGGTA TCTCGCCAAG TGATCAAGCT CTAGCCCACG CCAAAGAGGT GCTAGGGCTA GATAAACCGC TCTTACAGCA ATACCTCTTA TGGCTTAAAA AGGCGCTCAC GCTTGACTTT GGACGCTCGT ATATCACGGG CTCGCAGGTA AGTGCGGATA TGGCGTATTA TCTGCCAAAC ACGCTAAAGC TGATCGGCTT TGCTTTGCTT CTTACGGTCG CGGTCTCTTT GCCGCTTGGA ATTTTGTCCG CGCTTTATAA GGACAAATGG GTCGATCATA TCGTGAGGTT CATATCGTTT TTGGGCGTGA GCACGCCGAA TTTTTGGCTG GCGCTCATAC TAATCAGCGT TTTTTCGGTG AAATTTAAAA TTTTGCCTCC GTTTGGCACG GGTGGGCTTA GCCATATCAT CATGCCCGCC TTTGCGATCT CGTTCATGAG TATAGCCATA AATGCGCGGC TCATACGTAC AAATATGCTA GAGCTCATGC ATTCAAGGCA TGTTTTATAC GCAAATATGC GTGGCATCGC TAAATTTCAA GTCATCGTCC ATTACGTTCT GAAAAACGCG CTCATACCTA TCGTCACGGC TCTTGGCATG CACCTTGGCG AGCTCGTGGG CTCTGCGATG GTGATCGAAA ACGTCTTTGC ATACGCGGGC ATAGGTAGAT ACACGGTCGC TGCTATCATA AACAACGACT ATCCGGTCAT CCAAAGCTTC ATCCTTTTCA TGGCGCTGGT GTTTATAGTA AGCAACCTCA TAACCGACAT AATCTACGCA TACATCGACC CTCGCGTGAG GCTTGCGGTA TGA
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Protein sequence | MKSYIFRRTA YIVPMLLVVS VFIFLILRLN GTDAAMSYLN ASGISPSDQA LAHAKEVLGL DKPLLQQYLL WLKKALTLDF GRSYITGSQV SADMAYYLPN TLKLIGFALL LTVAVSLPLG ILSALYKDKW VDHIVRFISF LGVSTPNFWL ALILISVFSV KFKILPPFGT GGLSHIIMPA FAISFMSIAI NARLIRTNML ELMHSRHVLY ANMRGIAKFQ VIVHYVLKNA LIPIVTALGM HLGELVGSAM VIENVFAYAG IGRYTVAAII NNDYPVIQSF ILFMALVFIV SNLITDIIYA YIDPRVRLAV
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