Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0774 |
Symbol | truD |
ID | 5407958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1120874 |
End bp | 1121998 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640872562 |
Product | tRNA pseudouridine synthase D |
Protein accession | YP_001408379 |
Protein GI | 154174417 |
COG category | [S] Function unknown |
COG ID | [COG0585] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAGG ACACCATTTT TAAGCCGCTT TACACGCTCA CGCACGCGCC GATAAACGCG CATTTTAGCA AAAATGCCGA CGACTTCGTC GTGCGCGAGC TACCACTTTA CAGTTTTAGT GGGCAGGGCG AGCACCTAAT CATCGAGATT GCCAAAAAGG ACATGACAAC GCAGGAGGCG CTACGCGCGC TTAGCGACGC TACTGGCGTG AAGCTACGCG AATTTGGCTA CGCGGGGCTA AAAGACAAGC AGGGCATGAC GACGCAGTTT GTCTCGATAC CGCGTAAATT TGAGGCGAAT TTGGCAAATT TCAGCTACGA AAAGATAAAA ATTCTAAGCA CCGTCGCGCA TGAAAATAAG CTTCGCGTCG GGCATCTGCG CGCAAATAAT TTTTTCATCC GCCTAAAAAA GGTCGTGCCA AGCGAGGCGG CAAAGCTGGA AAATGCGATC AAAACGCTGG ATACATCGGG CTTTGCGAAC TATTTTGGCT ATCAGAGATT TGGTAAATTT GGCGATAACG CCGCGAGCGG GCAGGAGCTG CTAAAATCTG GCACGCTAAA TGGCAAGCGG CTGAAAAATC CGAAAATGAG CGAGTTTTTG ATCTCGGCGT ATCAAAGCGA GCTTTTTAAC CGCTGGCTTA GCAAACGCGT TGAAATTTCG CGCTTTGCAC AGGATTTTAG CCTCGCAGAG CTAGCTGAAA TTTATAAATT TATTCCGCGC GAGGAGCTAA AAAGCTTAAA GGCGCAAAGG CAGTTTTTTA AGCTGATCGC GGGCGAAGTT TTGGGGCACT ACCCGTATGG CAAATGCTTT TTGTGCGAGG ATTTGGACGC GGAGATAGAA AGATTTGCTC GCCGTGACAT CACGAGCTGC GGACTCATCG TGGGAGCAAA AGCCTACGAG GCGACCGGCA CGGCACGCGT GATCGAGGAT GAAGCCTTTG GTGAGGCGCG CGAATTTAAC GCTAAAATGA GTGGCTCGCG GCGTTTTGCG TGGAGCTATC TTGAAAACGT GGAGTATAAA TACATCCCTG AAAAGGCGCA TTTTACGGTG AGCTTTACGT TGCAAAAGGG GTCGTATGCG ACGGTGGTGT TGGAAGAGAT TTTGCATAAA AATATCTTTG AGTGA
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Protein sequence | MQEDTIFKPL YTLTHAPINA HFSKNADDFV VRELPLYSFS GQGEHLIIEI AKKDMTTQEA LRALSDATGV KLREFGYAGL KDKQGMTTQF VSIPRKFEAN LANFSYEKIK ILSTVAHENK LRVGHLRANN FFIRLKKVVP SEAAKLENAI KTLDTSGFAN YFGYQRFGKF GDNAASGQEL LKSGTLNGKR LKNPKMSEFL ISAYQSELFN RWLSKRVEIS RFAQDFSLAE LAEIYKFIPR EELKSLKAQR QFFKLIAGEV LGHYPYGKCF LCEDLDAEIE RFARRDITSC GLIVGAKAYE ATGTARVIED EAFGEAREFN AKMSGSRRFA WSYLENVEYK YIPEKAHFTV SFTLQKGSYA TVVLEEILHK NIFE
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