| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1589 |
|---|
| Symbol | |
|---|
| ID | 5596959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 572527 |
|---|
| End bp | 573606 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640929152 |
|---|
| Product | transcription termination factor NusA |
|---|
| Protein accession | YP_001466460 |
|---|
| Protein GI | 157165601 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGC TAAATGAGCT TAGAAAAGAG ATTGATAGCA TCGATGATCT CATCTTAAAT
AAACTAAATG AAAGAATGAA GCTTGTTGAG CAGATCGGCA AGCTAAAGCA AACGACTGGG
ACGCCTATAT ATCGTCCTGA GCGCGAGCGA GCCATTATAA ACCGCTTAAC TAGCCTTAGC
AAAGATAAAG CCTTAAATAA GGCTGCGATC GAGGCTATTT ATCTTGAAAT TTTTGCTGTT
AGTAGAAATT TAGAGATGCC TCAAAAGATC GTCTATCTAG GACCTGAGGG CACTTATACG
CATCAAGCAG CGCAAAGTAG ATTTGGTGCG ATGAGTGCCT ATCTGCCACT TGCTACTATC
GAGGCAGTTT TTACAAAGCT AGCTCAAAAA GAGGCAAAAT ACGGCGTCGT GCCTATCGAA
AACAACACTG AAGGCGCTGT TGGAGCTACG CTTGATTGTT TGAGCAAATT TGATGATATA
AAGATAGTGG CAGAGCTCTA CGTAGATATC CACCACAGCT TTGTTAGCAT AAATGAAAAT
TTAAAAGAGA TAAAGCGAAT TTACTCGCAT CCGCAAGGTT ACAACCAGTG CCGTAAATTT
TTAGAAGATC ACTTGCTAAA TGAGGTCGAA TTTGTCCCAG CTAAATCAAC CGCAGCAGCT
GCATATATGG CATCTATGGA TAGAGAATCA GCTGCCATTT GCTCAAAAAT CGCAGCTAAA
ATTTACAACG TGCCAATCGT CTATGAGACT ATTGAAGATA ATATGGCAAA CAGAACGAGA
TTTCTCATTC TTAGTGATTT TAAAAACGCC AAGGTTGAAA ACTCAAAAAC TTCGATCCTA
GCAAAGACTG ATCATAGTCC AGGACGCCTT GCTGATCTGC TTTCTATCTT TAAAAATGAA
AATATCAATA TCACAAAACT TGAGTCACGT CCTATAAAGC AGCGCGAATT TAAGTCAATT
TTTTATCTTG ACTTTGAAGG TCATATCGAC GATGAGAAGG TGCAAAACGC CTTTGAACTC
GCAAAAGAGA GCGGCGCTGA GATAACGTGG CTTGGAAGCT ATTTAAACGG AGATGAGTAA
|
|---|
| Protein sequence | MQELNELRKE IDSIDDLILN KLNERMKLVE QIGKLKQTTG TPIYRPERER AIINRLTSLS
KDKALNKAAI EAIYLEIFAV SRNLEMPQKI VYLGPEGTYT HQAAQSRFGA MSAYLPLATI
EAVFTKLAQK EAKYGVVPIE NNTEGAVGAT LDCLSKFDDI KIVAELYVDI HHSFVSINEN
LKEIKRIYSH PQGYNQCRKF LEDHLLNEVE FVPAKSTAAA AYMASMDRES AAICSKIAAK
IYNVPIVYET IEDNMANRTR FLILSDFKNA KVENSKTSIL AKTDHSPGRL ADLLSIFKNE
NINITKLESR PIKQREFKSI FYLDFEGHID DEKVQNAFEL AKESGAEITW LGSYLNGDE
|
|---|
| |