Gene CCC13826_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_0889 
Symbol 
ID5597632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand+ 
Start bp647245 
End bp647904 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content35% 
IMG OID640929222 
Productperiplasmic protein 
Protein accessionYP_001466530 
Protein GI157164834 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0471962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTCA AAGCAAAATT TTGGACGCTT ACTTTAAGCG TCCTTTTTTC GTTATTAGCA 
TTAAATGCTG TCGGGGATTT TATAAAACAA ACAACGATAG CAAAGGTGGC TAAAATTTAT 
GGAGAAGATG CAAGAAGAAG GGCATCGGCA TTAAATTCTT TAATGACTTC ATTGCAAGAT 
GCAACCGAAC AAGAGAAATT AATAAAAGTA AATGATTTTT TTAACTCTTT TAGGTGGGTT 
GATGATATGC AACTTTGGCA TAAAAAAGAT TACTGGGCTA CCAGAATGGA ATTTGTAGGA 
AAAGGCGCTG GTGACTGCGA AGACTACGTT ATCGCAAAAT ATTTCACACT AAAGCAACTT 
GGAATTCCAA CTCAAAAATT ATACTTCACA TACGTTAAAG CCTTAAGATA CAACCAAGCA 
CATATGGTTT TGGCATATTA TGATACACCA AAGTCTATTC CATTAATTTT AGACAACATA 
AATGGTAAAA TAAAAATCGC AACTCAAAGA ACAGACCTTG TGCCAGTTTA TAGTTTCAAC 
GGTGATTCGC TATACTTGGC AAAACAAGAA GGTCTTGGTC AGGCAATACC AGGTGGAAAT 
AAAAAACAAA ATCCTAAGTG GATGGAATTA ATAGATAGGA TAGGAAAAGA GGATTTATGA
 
Protein sequence
MRVKAKFWTL TLSVLFSLLA LNAVGDFIKQ TTIAKVAKIY GEDARRRASA LNSLMTSLQD 
ATEQEKLIKV NDFFNSFRWV DDMQLWHKKD YWATRMEFVG KGAGDCEDYV IAKYFTLKQL 
GIPTQKLYFT YVKALRYNQA HMVLAYYDTP KSIPLILDNI NGKIKIATQR TDLVPVYSFN 
GDSLYLAKQE GLGQAIPGGN KKQNPKWMEL IDRIGKEDL