Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0555 |
Symbol | ribE |
ID | 5597016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1563980 |
End bp | 1564594 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640930111 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_001467390 |
Protein GI | 157165754 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.560873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAATG GCTTAATCAG GGAGCTTGCC GAGGTCATTA GCTACTCGCA AAATGTTTTA CGGCTAAAGG CTAAATTTCG TCCAAATTTA GGCGACAGCA TCGCAGTAAA TGGTGCATGC TTGAGTGTGA TAAAACTATA TGATGATGGC TTTAGCGTGG AGCTAAGCGC AGAGAGCAGG GCAAATATCG CGGTTGAAAA TTTAAGTGGC TTGGTGCATA TCGAGCCCGC GATGAAGCTA GCAGAGCGAG TAGATGGGCA TTTGATGCAA GGGCACATCG ACTTTATCGG CGTGATCTCA GCTATAAAAA AGCATGAAAA TGGCGTTGAT TTTTACATCG ACTTGCCACG TGAGGCGATG GCTCTGATGG CAAACAAGGG CTCGGTGGGC GTTGAGGGCG TGAGCCTTAC GATAAATGAA ATTTTGCCAA AGGGCATAAG ACTAACCATC ATACCGATCA CATTTAGAGA TAGCCTTTTT GGCACTTTCA AGGTCGGCAG GCGCGTAAAT ATCGAGAGTG ACCTGCTGGC TCGCTACGTG GCTAGGATGC TTGAGGCCAA GCAAAATGGC GGTCTTAGCT GGGACGAGGT CGAGAGAATT TCAAGCCTTT ACTAA
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Protein sequence | MFNGLIRELA EVISYSQNVL RLKAKFRPNL GDSIAVNGAC LSVIKLYDDG FSVELSAESR ANIAVENLSG LVHIEPAMKL AERVDGHLMQ GHIDFIGVIS AIKKHENGVD FYIDLPREAM ALMANKGSVG VEGVSLTINE ILPKGIRLTI IPITFRDSLF GTFKVGRRVN IESDLLARYV ARMLEAKQNG GLSWDEVERI SSLY
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