| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0393 |
|---|
| Symbol | expD |
|---|
| ID | 5597465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1395569 |
|---|
| End bp | 1395952 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640929959 |
|---|
| Product | TonB system transport protein ExbD |
|---|
| Protein accession | YP_001467238 |
|---|
| Protein GI | 157163947 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02804] TonB system transport protein ExbD, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0498331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTAA ATAAAAAAGA TGGGTTAAAT ATCGTCCCAT TTATCGATAT CATGCTCGTT
TTGCTAGCCA TCGTGCTAAG CATCTCGACC TTCATCGCCC AGGGCAAGAT CGCAGTCGAT
CTACCAAGCG CTAACAGCAC CGAGCAGATA AAAGAGGACG AGAAAAAAGT GAGTGTCGTT
ATCGATAAAG ATAATAAATT TTTTATAGAT GACGCGGAAA TTTCGGAAGA TGAGCTGAAA
GATAAGCTAA ATGCCATTGA TACTAAGACT TTAGTGCAGC TAAAAAGCGA CAAAAACGCT
AAATTTGAGA GCTTTGTGAA GGTCATAGAT ATATTAAAAG AAAAGGGACA CGAAAACTTT
GCAATCCAAA CAGTCTCTGA GTAA
|
|---|
| Protein sequence | MRLNKKDGLN IVPFIDIMLV LLAIVLSIST FIAQGKIAVD LPSANSTEQI KEDEKKVSVV
IDKDNKFFID DAEISEDELK DKLNAIDTKT LVQLKSDKNA KFESFVKVID ILKEKGHENF
AIQTVSE
|
|---|
| |