Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_1525 |
Symbol | tppB |
ID | 5457517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 1525372 |
End bp | 1526958 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | di-/tripeptide transporter |
Protein accession | YP_001424869 |
Protein GI | 209364101 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0251804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTTCAG AGAATATTTG GGCAAATATC TATCTAATAT TTTCTGGAAT ATTACGAAGG GGGAAAGCAT TTATGTCTGT CCGATCACTG ACCGGCCAAC CTAAACCTTT TTATCTTATT TTCTTTATTG AAATCTGGGA ACGCTTTGGT TATTACGGGG TTCAAGCCCT ACTCGTGTTA TACATGGTAG AACGCTTGGG CTATCAAGAT AGCCATGCCG ATTTCCTTTT TGCCGCTTTT AGCGCCTTAG TTTTCTTACT TCCCTGCCTG GGGGGGTACG TTGGCGATAA GCTGCTCGGA ACGAAGCGCA CTATCTTGTT GGGGGCAATT GTATTGGCCC TCGGCTATTT ATTACTGTCG CTGCCGGCGA TTTCTAACGC TTATCTCGCG CTTCCTTTAG CCTTTATTGC TGTCGGGAAC GGTTTGTTCA AAGCAAATCC GTCGAGCTTA CTGTCCAAAG TTTATGAAAA AACGCAGCAC AATCTGGACA GTGGTTTTAC TCTCTATTAT ATGGCCGTTA ACATCGGAGC GGCTGTTTCG ATGAATTTAA CGCCAATCTT AAGCAAGTTT TTTGGCTGGC ATGTGGCTTT TTCTGTTTGT TGCGCTGGGC TAGTCATTGC CATCTTTAAT TTTTTTGCTA TGCGGGGAAG TATTGCCGAT TACGGTTCAA AGCCGGATCA GAGCCCTTTA CGTTTGCATT ATTTAATGTA TGTGTTGCTC GGCACGGCAG GGCTTATTGT TGGCGGGTAT TTCTTGTTAA TTCATTTTCA AATAATGTAT TGGCTCCTTT CTATCGGAAC GGTGGCTTTA TTGCTGACTT ATTTTGTTTT AACGGGGAAA GCTAAGCCAG AAGAACGCAA GGGAATGTTT TTATTTATTA TCTTATTTTC CCAAGCCGTT GTCTTTTTTG TGTTGTATTT TCAAATGCCG ACATCGTTAT CGCTCTTTGC ATTGCGAAAT GTTCACCATT CGATCTTGGG CATTCCTATT GAACCGGCTC AATTCCAAAT GCTTAATCCG CTATGGGTCA TGATTATGAG TCCGGTGATG GCGGTAATTT ATCAAAGGCT GCATAAGCGT GGTCGCGATC TATCGATGCC GGCCAAATTT TCGTTGGGAA CGTTCTTGGC GGGCCTTGCT TTTTTATCGC TTCCTTTTGG GGCTTTATTC AACCATCATG GTGTAATTTC GGGGATGTGG CTGGTGCTTT CTTACTGGTT GCAAAGTACC GGCGAATTGC TGGTTAGTGC GCTCGGATTG TCGCTTGCGG CTCGTTATGT GCCTCAGCGA TTTATGGGGT TCACCATGGG CCTCTGGTTT CTCTGTACCT CCATTGCAAG CATCATTGCA GGGAAGGTAG CGAGCATAGC CAGCATTCCA AAGAATATTT CGAAAGATGC TCTCATGTCG TTACCTATTT ATGACCATTT ATTCATGAAA ATCGGTCTGA TTACCGTAGC GATATCGCTC GTTATGTTTA CGTTGGTGCC TTTATTGAAA AAACTAGCAG CCAATGACAA ACAGTTTGTT GACAAGCAGG ACGTCGCCGA GCTGCTGAGC GATGATCAAT TAGTGGAGTT AAGTTAG
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Protein sequence | MISENIWANI YLIFSGILRR GKAFMSVRSL TGQPKPFYLI FFIEIWERFG YYGVQALLVL YMVERLGYQD SHADFLFAAF SALVFLLPCL GGYVGDKLLG TKRTILLGAI VLALGYLLLS LPAISNAYLA LPLAFIAVGN GLFKANPSSL LSKVYEKTQH NLDSGFTLYY MAVNIGAAVS MNLTPILSKF FGWHVAFSVC CAGLVIAIFN FFAMRGSIAD YGSKPDQSPL RLHYLMYVLL GTAGLIVGGY FLLIHFQIMY WLLSIGTVAL LLTYFVLTGK AKPEERKGMF LFIILFSQAV VFFVLYFQMP TSLSLFALRN VHHSILGIPI EPAQFQMLNP LWVMIMSPVM AVIYQRLHKR GRDLSMPAKF SLGTFLAGLA FLSLPFGALF NHHGVISGMW LVLSYWLQST GELLVSALGL SLAARYVPQR FMGFTMGLWF LCTSIASIIA GKVASIASIP KNISKDALMS LPIYDHLFMK IGLITVAISL VMFTLVPLLK KLAANDKQFV DKQDVAELLS DDQLVELS
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