Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CBUD_0771 |
Symbol | rluD |
ID | 5459479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Coxiella burnetii Dugway 5J108-111 |
Kingdom | Bacteria |
Replicon accession | NC_009727 |
Strand | - |
Start bp | 748899 |
End bp | 749870 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_001424165 |
Protein GI | 154705997 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.497941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTGCTT CTCGCATCGA ATTAAAAAAA ATCATTCCCC CTGAGCTTGC CGGTGCTCGA CTAGATCAAG TATTGGCAAA ATTGTTTCCA GATTATTCTC GTTCACAACT GCAAAATTGG ATTCGGGGTG GTCATGTCAA AGTAGATGGA ATACAAAAAA CCAAAGCCAG AGAAAAAGTG CGGGAGAATC AATTCATTGA GATAGAGGCC CAATTAGAAC CTAATGAGCG CTGGGTTCCA CAACCGATCC CGTTAGATGT CATTTATGAA GACGAAACTT TGCTGGTGAT CAATAAACCC GTTGGCCTTA TCGTTCACCC CGGCGCTGGT GTTCGAGATC AGACATTAAT TAACGCTTTA TTGCATTATG ACCCGAGCTT AAGCGTGGTG CCCAGAGCCG GCATCATTCA CCGCCTAGAC AAAGACACCT CGGGCTTGCT CTTAATCGCC CGCACCTTAG CTTCGCATCA TGCTTTAATA AAAACCATGA AAGCCCGCCA AATCGTCCGA GAATACGAAG CGATTGTAAA GGGCGTTTTG ATTTCCGGCC GAACGATTGA GGCCCCCGTC GGCCGCCACC CCATTCATCG CACGCGCATG GCGGTAGTCG AATTCGGTCG CCCGGCCATT ACTCATTTCC GGATTATCAA ACGCTACCGC GCGCACACGC ACATCCGCGT GCAACTCGAA ACGGGACGGA CTCATCAAAT TAGAGTGCAT ATGGCACACA TTCACCATCC TTTGGCGGGT GACCCCGTCT ATGGTAGTCA CGTCGGGATT CCTGTGCATT TGTCCGATCC GCTCCAAACC GCCTTGAAAA CACTAAAGCG GCAGGCACTT CACGCAGCAA CTTTACAATT CTCCCACCCC GTCGACCAGC GTCCGATGGC GTGTCACGCG CCTCTACCCG CGGACATGGC CCACCTGTTA GAATGCCTAG AAGATGATTA TTCCCAATTG GCCCGCTCCT AA
|
Protein sequence | MCASRIELKK IIPPELAGAR LDQVLAKLFP DYSRSQLQNW IRGGHVKVDG IQKTKAREKV RENQFIEIEA QLEPNERWVP QPIPLDVIYE DETLLVINKP VGLIVHPGAG VRDQTLINAL LHYDPSLSVV PRAGIIHRLD KDTSGLLLIA RTLASHHALI KTMKARQIVR EYEAIVKGVL ISGRTIEAPV GRHPIHRTRM AVVEFGRPAI THFRIIKRYR AHTHIRVQLE TGRTHQIRVH MAHIHHPLAG DPVYGSHVGI PVHLSDPLQT ALKTLKRQAL HAATLQFSHP VDQRPMACHA PLPADMAHLL ECLEDDYSQL ARS
|
| |