Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_12508 |
Symbol | |
ID | 9297991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 2711550 |
End bp | 2713388 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | putative TonB-dependent outer membrane receptor |
Protein accession | YP_003717243 |
Protein GI | 298209064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGATTT TTTCTACAAA TGCACACTCG CAATTGGATA GCCTCCAACA ATTGCCTGAG GTTATCATTA GTGATGTAAG CTTGACAGAT TTTTCTACTG GTACTACAAC CACAACATTA AGAGATAGTG TTTTTTACAA TCAAGCAACA CCTTTACAGC AAATTTTACT ATATAACAGT TTAATATATT TTAAGGAAAA TGGTCCTGGT GGTGTGTCTT CTCCATCATT TAGAGGAACA AATGCCTCTC AAACTGCTGT GCTGTGGAAT GGTATTTCAA TAAATTCTCA GTTAAATGGG CAAACCGATT TTAATACCAT AAGTACTCGA AACTATGATA ATCTTGTAGT AAGACATGGT GGCGGAAGCA TTCCTTACGG CAGTGGAGCT GTTGGTGGTA GTATACATTT AAATAACACC ACTAAATACA ACACTGGTTT TAAAACAAAA TTGTTAGAAA GCTACGGAAG CTTTGAAACC TATGAAGCCC AAGCTAAATT AAGTTATGGT ACTAAAAAGT TTTATATAGA AACGGCATTA GATGGTTTGC AAAGTGAAAA CGATTTTAAA TATTTAAATA CTAACCTTAG GAATGATAAT GGTGCTTATA AAACTATAAA TGGAAATTTA AATTTTGGAT TTAAATTGAA TAAGGACCAT CAATTAAATG TTTATCATAA TACATTTTTA AGTGATAGAG AATTTAGTAG AACACTAACG GCTGTTACTT TTGATGGTTA TGAAGATGAA AATACAAGAA CCCTATTAGC TTGGACAGCA AAAGGAAAAG CATTTGAAAG TGTAACCAGG TTAGCTCATG TCTTTGAGTC TTATAAATAC TTTCCAGACA AAAATGTAGA CGATTTTTAT TTTTATGGGA AAGCGATTAG GTATGTTTTT AACAACGAGT TTAAATATCA ATTTAATACT AAGACAAGTT TAAAAACTAT TGCAGACCTT AATACTACAA GTGCAGAAGG ATCTAACATA GAAGAAAGTA ATAGAGATGT AATTTCTGGC GCTGCATTGT TAGAGCATAA GTTGAGTAAA TTTATTACTG GTACACTTCA ACTAAAACAG GAGTTTTCTA ATGATTATGA AAGCCCATTG TTATATGGTA TTTCTGCAGA CTATCTTTCG GCTTTTCAAA AGGATAACAC TATTCGCCAA TTTGGTATTG GCTTTAATGC ATCCAAAAAT TTTAGAGCAC CAACGTTTAA CGACTTAAAT TGGAACGGTG CCGGCGCTAT CGGAAATCCA GATTTATTGC CAGAAATAAC ATATCAAGGA GAACTAAACC AAACATTAAA ATTTTCTTTC GGAACATTTA AGCTAGCTGA ATTTATTAGT TACTCAGAAA ATTTGATTCA ATGGTTACCC AACCAACAAG GGTTGTTTAT GCCTAACAAT ATTAAGGATT CTAGAAACTA CGGTATAGAG GCGCAATTTC AGGCTTATTA TAATTTTGGC TCACATAAGT TTACTACTAC AACAGGTTAC ACGTATGTTG AGGCCAAAGA TTTATCAACC AATGCACAAT TTATATATGT GCCTAAACAT AAATTTATTG GAAGTTTAGG TTACAACTAT AAATCATTAC ACCTTCTGTA TCAGTTTTTA TACAATGGTG AGGTCTTTAC AAAGACAGAC AATTCTGAAA CTCTTGGAGG TTATGCAGTA TCTAATGTTA ACCTTTCATT TAAGCCAAAA TCTAAAGGAT TAAACTGGTT TACAATACAA TTATCTGTAA ATAATATCTT CAATAAAAAT TATCAAAATA TAGCGTTTAG GCCAAATCCT GGACGCCACT ATTCAATTTT ACTAACTCAA TCCTTCTAA
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Protein sequence | MWIFSTNAHS QLDSLQQLPE VIISDVSLTD FSTGTTTTTL RDSVFYNQAT PLQQILLYNS LIYFKENGPG GVSSPSFRGT NASQTAVLWN GISINSQLNG QTDFNTISTR NYDNLVVRHG GGSIPYGSGA VGGSIHLNNT TKYNTGFKTK LLESYGSFET YEAQAKLSYG TKKFYIETAL DGLQSENDFK YLNTNLRNDN GAYKTINGNL NFGFKLNKDH QLNVYHNTFL SDREFSRTLT AVTFDGYEDE NTRTLLAWTA KGKAFESVTR LAHVFESYKY FPDKNVDDFY FYGKAIRYVF NNEFKYQFNT KTSLKTIADL NTTSAEGSNI EESNRDVISG AALLEHKLSK FITGTLQLKQ EFSNDYESPL LYGISADYLS AFQKDNTIRQ FGIGFNASKN FRAPTFNDLN WNGAGAIGNP DLLPEITYQG ELNQTLKFSF GTFKLAEFIS YSENLIQWLP NQQGLFMPNN IKDSRNYGIE AQFQAYYNFG SHKFTTTTGY TYVEAKDLST NAQFIYVPKH KFIGSLGYNY KSLHLLYQFL YNGEVFTKTD NSETLGGYAV SNVNLSFKPK SKGLNWFTIQ LSVNNIFNKN YQNIAFRPNP GRHYSILLTQ SF
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