| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_11133 |
|---|
| Symbol | |
|---|
| ID | 9297714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2417908 |
|---|
| End bp | 2419161 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | TPR repeat protein |
|---|
| Protein accession | YP_003716968 |
|---|
| Protein GI | 298208789 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.474145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA GAATTATAAC AGTAGCTTTA ATGGCTTTTG GAGTAACTCT TTTTGCTCAA
AAAAAAGAGA TAAAAAAAGC TGAAAAAGCT CTTGAAAAAG AAAGCTATAG TGAAGCAATG
ACTTTTCTCA ACCAAGCAGA GCCTATGTTA GCAGATGCAG ATGAGGAATA TAAAGCTCGC
TTTTATGCGG CTAAAGGTCA GGCAATTTTT AAAGATGGTT CAATTTCTCT AGATAAAATT
CAAGAAGCTG TAAGTGCTTA CGATAAAGCT TTAGAGATAG AGGAAGGTAT GGAGCAAGCT
ACAAACGGTA AACTTAATGC AGCTAATACA GTTTTGGCTT TAGCAACAGA AGATTACAAA
GCTCAGCGTT TTTCTGAAGG AGCAAAAAAG TATTATATGA CTTATAAATT AAGCCCTGTA
GATACGTCTT TCCTTTATAA TGCAGCTATT TTATCTGTTT CAGGAAACGA CTTAGAGTCT
GCTCTTAAAT ACTACAAAGA ACTTGAGAGT ATGAACTATG ATGGTTCTGA AGTTGAGTAT
ACTGCTATTA ATAAAGAAAC AGGTGAAGTT GAAACTTTTC AGAAAGATGA ACGTGATCTT
GCTGTAAGAT CCGGACAATA TATTAAACCA GAAGACAAAA AATCTGAGTC TAAAAAACCT
GAGATAATTA AAAATATAGC TTTAATATAT AATGATTTAG GGAAAAGCGA AGAAGCTATT
GCTGCTGTAG AAAAGGCAAT GGAGCAAAAC CCAAATGATG TTGCTTTAAT GCAAGTAGAA
GCTAACGTAT ATTACGAAAT GGGTAATATG GAGCGTTACA AAGAAATTAT GGAAAAGGTT
GTAGAGCAAG ACCCAAACAA CTCTGCACTT TATTACAACT TAGGTATTAG CTCAAGTAAA
TTAGGAGACA GTGAAGCCGC AATAGGTTAC TTTAAAAAAG CTGCAGAAAT AGACCCTAAG
AATACAGATG CAAAAATTAA CATTGCTGCT GAAATTTTAA AAGAAGAAAA GCCATTGGTT
GAACAAATGA ATGCGCTTGG AACATCTAAC GCAGATTTCA AGAAATATGA TGAGTTAAAA
GAAAGACGTA AGCAAATTTA CCTTTCTGCT GTACCATATT TAGAAAGTGT TATTGAGCAG
AAGCCAGAAA ACGTTGAAGC TACTAGAGTT TTAATGAATA TTTACTACCA ATTAGATAAT
GAAGCTAAAG CTAAAGAAAT GAAAGCTAAA CTTCAATCTT TTGAGGGTAA CTAA
|
|---|
| Protein sequence | MKTRIITVAL MAFGVTLFAQ KKEIKKAEKA LEKESYSEAM TFLNQAEPML ADADEEYKAR
FYAAKGQAIF KDGSISLDKI QEAVSAYDKA LEIEEGMEQA TNGKLNAANT VLALATEDYK
AQRFSEGAKK YYMTYKLSPV DTSFLYNAAI LSVSGNDLES ALKYYKELES MNYDGSEVEY
TAINKETGEV ETFQKDERDL AVRSGQYIKP EDKKSESKKP EIIKNIALIY NDLGKSEEAI
AAVEKAMEQN PNDVALMQVE ANVYYEMGNM ERYKEIMEKV VEQDPNNSAL YYNLGISSSK
LGDSEAAIGY FKKAAEIDPK NTDAKINIAA EILKEEKPLV EQMNALGTSN ADFKKYDELK
ERRKQIYLSA VPYLESVIEQ KPENVEATRV LMNIYYQLDN EAKAKEMKAK LQSFEGN
|
|---|
| |