| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_05290 |
|---|
| Symbol | |
|---|
| ID | 9296552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 1198212 |
|---|
| End bp | 1199075 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | predicted metalloprotease |
|---|
| Protein accession | YP_003715822 |
|---|
| Protein GI | 298207643 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGA AAGGTAGAAG AAAAAGTGGC AATCTCGATG ACCGTCGTGG TATGAGTACC
AAAGGTAAAG TCGCCGCTGG TGGTGGCGTG ATTGCTGTTA TTGTCATCTT ACTCCAACTT
TTTGGAGGCG AAACAGGACA ACAGATTGCA CCAATTGTTG AGCAAATCAA TAATTCCAGA
ACGACGACTC AGCAAACCAC TTCAAGAGAA CTCACTTCAG CAGAACAAGA AATGGGCGAT
TTTATGGCAA CTGTTTTAGC AGATACGGAA GATGTATGGA ATCAGTTATT CAGACAAAAT
AATTTGGGCG ATTATAAAGA ACCACAAATG GTATTATTTA CCGATGTTGT AAACACACGT
TGTGGAAAAG CAAGTTCAGC TTCTGGACCA TTCTATTGTC CTGGCGACCA AAAGGTCTAT
ATGGATTTAG CATTCTTCAA AGAATTGCGA ACGCGTTTTG GCGCCAAAGG TGGTGATTTT
GCTATTGCCT ATGTCACAGC TCACGAGATT GGGCATCACG TTCAAACCTT ATTAGGAACA
TCGCGCCAAG TTCAACAAGC AAAACAAGGG CGTTCTCAGG CAGATGCCAA TAAGTTATCA
GTCGCTCAAG AACTCCAAGC TGATTTTTAC GCAGGTTTAT GGGCGCATTA CAATAAAAAA
TATTTGGACG AAGGCGATAT CGAAGAAGCA TTAAGCGCGG CACAAGCCGT TGGTGATGAT
GCCATTCAAA AAAGAACCAG AGGTTATGTT CAGCCAGACA GTTTCACACA CGGCACAAGC
AGGCAACGTA TGGAGTGGTT TATGAAAGGC TTCAGAAGTG GTGATATGAG TCAACACGAT
ACGTTTAAGG CCATTTTAAA TTAA
|
|---|
| Protein sequence | MKWKGRRKSG NLDDRRGMST KGKVAAGGGV IAVIVILLQL FGGETGQQIA PIVEQINNSR
TTTQQTTSRE LTSAEQEMGD FMATVLADTE DVWNQLFRQN NLGDYKEPQM VLFTDVVNTR
CGKASSASGP FYCPGDQKVY MDLAFFKELR TRFGAKGGDF AIAYVTAHEI GHHVQTLLGT
SRQVQQAKQG RSQADANKLS VAQELQADFY AGLWAHYNKK YLDEGDIEEA LSAAQAVGDD
AIQKRTRGYV QPDSFTHGTS RQRMEWFMKG FRSGDMSQHD TFKAILN
|
|---|
| |