Gene Bxe_C1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1273 
Symbol 
ID4010785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1331921 
End bp1332409 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content68% 
IMG OID637953863 
Productsugar binding or transport, RbsD/FucU 
Protein accessionYP_556483 
Protein GI91781276 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.115961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAAGA ATCTGGACCC GCTGTTGAAC GCCGACGTGC TGTACGCACT GCGCGCGATG 
GGGCACGGCG ACGAGCTGGT GCTGTGCGAC GCGAATTTTC CCGCCGACTC CGTCGCCCGC
GCCACGGTGA CCGGCAAGCT GCTGCGCCTC GACGGCGTGG ACGCGGCGCG CGCGATTCGC
GCGGTGCTGT CGGTGCTGCC GCTCGATACG TTTGTCGACG CTCCGGCGCT GCGCATGGAA
GTGGTGGGCG AGCCGCATAC GTTGCCCGCG GTGCAGCGCG AAGCGCAGGC CGAAGTGAAT
GCCGCCGAAG GGCGCGACGT GCCGTTTGCG TCGATTGAAC GGTTCGCGTT TTACGAGCGT
GCGCGCCGGG CTTACTGCGT GATCGCGACG GGCGAGCAGC GCGGCTACGG CTGTTTCGTG
TTCAAGAAGG GCGTCCTGCT CGCCCAGGAC GCGCCCTCGA CCGCATTGCA GCAAGGAGCG
CGGCAATGA
 
Protein sequence
MLKNLDPLLN ADVLYALRAM GHGDELVLCD ANFPADSVAR ATVTGKLLRL DGVDAARAIR 
AVLSVLPLDT FVDAPALRME VVGEPHTLPA VQREAQAEVN AAEGRDVPFA SIERFAFYER
ARRAYCVIAT GEQRGYGCFV FKKGVLLAQD APSTALQQGA RQ