Gene Bxe_C1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1253 
Symbol 
ID4010765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1308320 
End bp1309054 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content59% 
IMG OID637953843 
Productbranched chain amino acid ABC transporter ATPase 
Protein accessionYP_556463 
Protein GI91781256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.133556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC TACTGGACGT GCGTGGATTG CGCAAACACT ATGGCCCGTT CACGGCACTT 
AACGGCGTGG ATTTATCTAT TGCGCCAGGC GAATTTCATG GGCTGATCGG GCCGAATGGA
TCGGGCAAAA GCACGCTGCT CAAATGTCTC GCCGGTGCAG AGATACCGAG CTCCGGCACG
GTGGCGTTCG ACGGCGTCGA CGTCTCGACA TTGCCACCGG CACGACGCGC GCGGCGCGGA
ATCAGTCTGA AGTTTCAGAT CACCAGTGTC CTGCCTCAGC TTAGCGCCTA TGAAAACGTG
CAGCTCGCCG CCCAGGCTCA TGCGGGCTTC TTTCAGTTGC TCCTGTCGCA GGTTCGGCAC
GATACCGCGG TCACGGTCGA ACAGCTGTTG AATCAATTCC GGCTCGCGGA TGTTGCCGAC
ACGCCAGTGG CAGAGCTCTC GCACGGACAT CAGCAATGGC TGGAAATCGC GATGGCGCTC
GCAATCCGTC CGCGCCTGCT CATTCTGGAC GAGCCGACTT CGGGCATGAG CGTCGAGGAG
CGCCGGGTGA CAGGCGAATT GCTGAGCTCA TTGAAGCGCG ATGGGTGTTC ACTTCTCATC
GTCGAACACG ATCTCGAGTT CATTCGCGAT CTATGCCATG CAATCACCGT ACTGGATCAG
GGTGAGGTCG TGGCAACGGG TTCGGTCAGC GAGATTCAGG CCAATCAGAA AGTCAGGGAG
GCCTATCTTG GCTGA
 
Protein sequence
MTTLLDVRGL RKHYGPFTAL NGVDLSIAPG EFHGLIGPNG SGKSTLLKCL AGAEIPSSGT 
VAFDGVDVST LPPARRARRG ISLKFQITSV LPQLSAYENV QLAAQAHAGF FQLLLSQVRH
DTAVTVEQLL NQFRLADVAD TPVAELSHGH QQWLEIAMAL AIRPRLLILD EPTSGMSVEE
RRVTGELLSS LKRDGCSLLI VEHDLEFIRD LCHAITVLDQ GEVVATGSVS EIQANQKVRE
AYLG