| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1235 |
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| Symbol | |
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| ID | 4010747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1290561 |
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| End bp | 1291697 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637953825 |
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| Product | ABC spermidine/putrescine transporter, periplasmic ligand binding protein |
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| Protein accession | YP_556445 |
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| Protein GI | 91781238 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0258695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAA AGCACATTCA GCCAGCACAC GACCTGCCGG ACGCGCAGGA ACTTACGCCG
GTGCTGCCGT CGAAGATCGA CGGCCGGCGG CGCGACATGT TGAAGGCCGC AGCAGCGAGC
CTGGCATTGG GGCCATCGAT GATTCGTCAG GTGCGCGCGA GCACGCGGCA GATTGTCGTC
GGCATCTGGG GCGGCGCGCA GGGCGACTTC ATTCGCAAGG TGGTTATTCC GCGATTCGAG
CGCGATTACA ACTGCAGCGT GCTTGCCGAG GAAGGCTTCA CGCTCGTCAA CGTCGCGAAG
ATGCGCGCGA CGTTGAAGAA CCCGAAATAC ACGGTGATGT TCATCGATGA CGTCGCGGTC
TCGACCTGCA TCACCGAGAA GCTGATCGCG CCGCTGCCGG TCGACCGAAT TCCGAACATG
GCGAATCTGA TGCCGCGCTT CAACTATGGC GGCTACGCGA CAGGCGTCGG AATCTCGATC
GGCGCAATGT ACCGGAACAC TTCCACGCCG GCGCCGAAGA GTTTCGCCGA TCTGTGGAGC
GACACGTATC GCGACAGCAT CAAGCTGAAC AGCTGGGAGA ACACGTCGGG CATCTACTTC
CTGATCGCGG CGGCCGCGGT CGTGACCAGC AAGCCGTTGA GCGCTGCCCA GTACGAGGTC
GACAAGATCT GGGCGAAGCT GCGCGACTTC AAGCCGAACG TGCAGAACAT CTACGTGTCT
GGCGTCGAGG CGGCCAACGA AGTCGCGCAG GGCCAGGCGA TGCTCGGCGG GATCGACTAC
TCGAAATTCA TCTATCCGTA TGCGGTCAAA GGCGCGCCGA TCGATATGGT GTTCATGAAG
GAAGGCAGCT TTGCGGGCGT GAACTGCCAG GTGCTGGTCG CCAATGGGCC GAATCAGGAC
CTGGGCGTCG CGTTCATCAA CCGGATGCTG TCGGCCGACG TGCAGAAGGC GTTGGCGGAG
TTCTCGCTGG TCGCGCCGCC GGTGCGCGGC GTCACGCTGA CACCGCAGAC GTTGCGTTAT
GTCGCGTACC CGGAGCAGCG CATGGATCAG CTCGGCCTGT TCATTCCCGA CTGGAAATTC
GTCAACCAGA ACCGGGCGAA GTGGACTGAG AAGACCAATG AGATCTTTAC TGCGTAG
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| Protein sequence | MNTKHIQPAH DLPDAQELTP VLPSKIDGRR RDMLKAAAAS LALGPSMIRQ VRASTRQIVV
GIWGGAQGDF IRKVVIPRFE RDYNCSVLAE EGFTLVNVAK MRATLKNPKY TVMFIDDVAV
STCITEKLIA PLPVDRIPNM ANLMPRFNYG GYATGVGISI GAMYRNTSTP APKSFADLWS
DTYRDSIKLN SWENTSGIYF LIAAAAVVTS KPLSAAQYEV DKIWAKLRDF KPNVQNIYVS
GVEAANEVAQ GQAMLGGIDY SKFIYPYAVK GAPIDMVFMK EGSFAGVNCQ VLVANGPNQD
LGVAFINRML SADVQKALAE FSLVAPPVRG VTLTPQTLRY VAYPEQRMDQ LGLFIPDWKF
VNQNRAKWTE KTNEIFTA
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