Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1115 |
Symbol | |
ID | 4010627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 1163083 |
End bp | 1164234 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637953711 |
Product | OmpC family outer membrane porin |
Protein accession | YP_556331 |
Protein GI | 91781124 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTA TCTACACTAC GGCTCTGCTT TTTTCCCTTG CGGCTGCCGC GCACGCGCAA AGCTCGCCGG GCTCCGGCGT CACCCTATAT GGCGTGGTGA TGTCAGGCCT GATCTACTCC AACAACTCGC TGAAAGGCGC ATCGATCGGC ACCGCGAACG GTCCCAGCCG CTGGGGCTTC AAGGGTGTCG AGGACCTGGG CGGCGGCACC AGCACGGTCT TCGTGCTCGA AGGCGGTTTC AATCCGAACA CCGGCACCGC GGCGCAGGGC AGCCGGGAAT TCGGCCGCCA GGCCTACGTG GGTCTGGCCA ACGGCCGTTA CGGCACGCTG ACCCTCGGCC GCCAGTACGA TCTCACGCAG GACTGGCTTG CGCAGTATTC TTCGCCGCTG ATGTGGAACG GCTACACGGC GACCATCGGC GACAACAACA ACTTCAATTA CCAGTTTCGC ACCAATAATT CGGTGAAGTA CGTGTCGCCC TCGTATCGTG GTTTGCAGGC CGGGTTGATG TACAGCTTCG GCGGCGTGGC CGGCAGCTTC GGCAACCAGA GCGCAGTCGG ATTCGGCGTG AACTACGCGC AAGGCCCGCT CAAGCTTTCC GCCGCCTACA TGCGCATGAA TCATCCGGCT TCGGCAGCCA GCGAAGGCTT GTGGACCACG GCGTCGTTCG CGTCGATCTC ACCCAGTTCG CCGACGGTCT CCTATGCGAT TGCGCCTTCG AGCATGGAAA TTTACGGCGC GGGCGGCCAG TACGCCTTCA CCAAAGACAC GTTCGCGGGC ATCGTCGTCA CGCATAGCCG CTACGACGAT CTGGGCGTCG CGCAACTGGG TCTCATGCAC GGCCGCGCCA GTTACACCAA CGTCGAAGCG AACGTGAGCC ATTATTTCGC ACCCGATTAT CAGGCTGCGA TCGACTACAC CTACACTATC GGCTCGATCC AGCCGACCGA CTTCAAACCG CAATATCACC AGATCTCGCT GATCAACAAC TACTTCCTGT CGAGGCGAAC CGCGCTCTAT CTGGACGGTA TCTTCCAGCT GGCTGCGGGT GATGCACAGC ACGCCAATAT TGAATACGCA AGCGGTTCTG GCGGGGCTTC GGCGACCAAG CGTCAGGTGT CCATAACCGC TGGTATTTAT CACCGGTTCT AA
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Protein sequence | MKRIYTTALL FSLAAAAHAQ SSPGSGVTLY GVVMSGLIYS NNSLKGASIG TANGPSRWGF KGVEDLGGGT STVFVLEGGF NPNTGTAAQG SREFGRQAYV GLANGRYGTL TLGRQYDLTQ DWLAQYSSPL MWNGYTATIG DNNNFNYQFR TNNSVKYVSP SYRGLQAGLM YSFGGVAGSF GNQSAVGFGV NYAQGPLKLS AAYMRMNHPA SAASEGLWTT ASFASISPSS PTVSYAIAPS SMEIYGAGGQ YAFTKDTFAG IVVTHSRYDD LGVAQLGLMH GRASYTNVEA NVSHYFAPDY QAAIDYTYTI GSIQPTDFKP QYHQISLINN YFLSRRTALY LDGIFQLAAG DAQHANIEYA SGSGGASATK RQVSITAGIY HRF
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