Gene Bxe_C1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1093 
Symbol 
ID4010605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1138029 
End bp1139024 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content53% 
IMG OID637953690 
ProductAraC family transcriptional regulator 
Protein accessionYP_556310 
Protein GI91781103 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCT TTTTTGCCCG CCGTAATCGC TATGCGACTC AGACCCAGAT ATTTCAGGAC 
GATCGCGCGA AAAAACGTAT AGGCATTGCA CTGTTCAATG GATTTTCACT GCCGGAGGCA
GCCACCGTAG TGGAGATTTT CCAGTCTGCC AATGCGCTCT GTCTGTCCAC GCGTATGAGC
GGCCCATGTT ACGACGTTCA TCTCCTCTCG ATGGACGGAG GCAGAATAGC GAGTTCGTCA
TCGGTATTCG TTTGCACAGA CACCATCAAA TCGGGTGGTC GCACGGACGA ATTCCATGCG
CTTTTCATTG CTGCGGGCGC CGGTGTCCAC AGTATGCTGA GTGAGGAACG TCTGGTCGCC
TGGCTGCATC GACTCGACTT GCGCAGCGAA CGGATTTTTC CAATCGCCGA AAAACGCTTA
CTACTGGACG ACACCAGGTC CTCCGATATA AGCCGGAAAT TGCGCCGCAG CGAAGGTGCT
CATGCGGTTG CATGGAACGG GTTAAAGGCG CCCGTCTCCC AACGAACAAG TACTCCGTTG
CGAGCTGCAC TAGCAATGAT CGAAGAAGAT TTCGGCGCAG AAGCCGCACG CGAAATCGCG
AGCTCCCTGC AGTTGCGTTT TGAGGCGCAG CTTAGCTCCG TTCAAAAAAA GAACATGTTT
AGCGCCGTAA GTGAAAAAAT ACAGTCATCG GCACAATGGT TGGAAATGAA CTGCGGCAGG
GCGATTACGA TTGAAGAGGC AGCGCAATTC GTCGCGATGA GTGAACGAAA TTTCTTGCGT
CGCTTCAAGA TGGAAATGGG TGTGACGCCG TCCGACTACC TTCTGTATGT GCGAGTTGAC
AAATGCTGCC GTCTTCTTTT TGAAACCGAC CTTCCAGTCG ACAAGATCGC CCGGCGGTGC
GGAATGGGAA GTGGCGGACA GCTTTCGAAA GTATTTCGCA AATACCTGGG AGCAACGCCA
ACGGAGTATC GTGCAAGCAA GCGATCTTTT AGCTAG
 
Protein sequence
MAVFFARRNR YATQTQIFQD DRAKKRIGIA LFNGFSLPEA ATVVEIFQSA NALCLSTRMS 
GPCYDVHLLS MDGGRIASSS SVFVCTDTIK SGGRTDEFHA LFIAAGAGVH SMLSEERLVA
WLHRLDLRSE RIFPIAEKRL LLDDTRSSDI SRKLRRSEGA HAVAWNGLKA PVSQRTSTPL
RAALAMIEED FGAEAAREIA SSLQLRFEAQ LSSVQKKNMF SAVSEKIQSS AQWLEMNCGR
AITIEEAAQF VAMSERNFLR RFKMEMGVTP SDYLLYVRVD KCCRLLFETD LPVDKIARRC
GMGSGGQLSK VFRKYLGATP TEYRASKRSF S