| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0979 |
|---|
| Symbol | |
|---|
| ID | 4010492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1012376 |
|---|
| End bp | 1013299 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637953582 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_556202 |
|---|
| Protein GI | 91780995 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.039685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCA GTGCCATCAA CGTATTCGTG CAGGTGGCCG AGACACGCAG TTTCGCTGCT
GCAGGCCGGC TGCTGGGTAT CTCCGCGTCG GCCGTCGGCA AACGGGTCAG CGCGCTGGAA
GAGCAGCTCG GCGTACGCCT GTTCCATCGC AGTACGCGCA GCGTCGCGCT GACGGCCGAA
GGCGGGCTGT TTCTGGAGCG TAGCCGCCGG ATACTCGGAG AGATCGAAGC GGCGCAGGCA
GAGCTATCAC AGGTCAACCT GAGCCCTCGC GGGCGCCTGA AGGTCAGTTT GCCACTGGTG
GCCGAGCCTT TTCTGTCGGT GATGGCGCAG TTCAAGCAGG CGTATCCGGA CGTCGATCTC
GATCTTGAAT TCACGGACCG CCGGGTGGAC GTCATTGACG AAGGTTTTGA CGCGGTCATC
CGAAGTGGCG ATGCGCCAGA CTCGCGCCTG ACAGCACGCC GTCTTGGCTC GTTCAGCATG
TTGCTGGTGG GGTCGCCCGA CTATCTGGCC CGATGTGGTA CCCCCGAGAC AGCCAGCGAC
CTGTCGCAGC ATGCATGCAT TCAGTTTCGC TACCCGAACA CCGGCAAGTT GCAAGTGTGG
CCACTCGATC AGGACGAGAT TACAGCGGAC CTTCAATTGT CGGCCGCGAT TATTTGCAAC
AATCTCGAAA CCCGGATTTT CTTCGCGCTA CAAGGACTGG GAATTGCCTA CCTGCCCGAC
TTCGCGATCA GGCAGCATCT CGCTGCTGGC CGGTTGATTC ATGTGATGCC CAGTTGCTCT
GAAGCCGACA CGATGTTTCG AATCATGTGG CCTTCGGGAA AGCATTTCGC GCCCAGGTTG
CGCGTGTTTA TCGACTTCCT GTGCGAGCGA TTATTTCCGG TAAATGTTTT GAACTCGAAA
GCGCAGTCCC GATCGACGCG GTGA
|
|---|
| Protein sequence | MESSAINVFV QVAETRSFAA AGRLLGISAS AVGKRVSALE EQLGVRLFHR STRSVALTAE
GGLFLERSRR ILGEIEAAQA ELSQVNLSPR GRLKVSLPLV AEPFLSVMAQ FKQAYPDVDL
DLEFTDRRVD VIDEGFDAVI RSGDAPDSRL TARRLGSFSM LLVGSPDYLA RCGTPETASD
LSQHACIQFR YPNTGKLQVW PLDQDEITAD LQLSAAIICN NLETRIFFAL QGLGIAYLPD
FAIRQHLAAG RLIHVMPSCS EADTMFRIMW PSGKHFAPRL RVFIDFLCER LFPVNVLNSK
AQSRSTR
|
|---|
| |