| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0760 |
|---|
| Symbol | |
|---|
| ID | 4010239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 754842 |
|---|
| End bp | 756227 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637953353 |
|---|
| Product | major facilitator superfamily multidrug efflux transporter |
|---|
| Protein accession | YP_555973 |
|---|
| Protein GI | 91780766 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.231673 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGG CGCAACGCGA TCACCTCGAC CCGCTGGTCT GGAAAATCAC GACCGTCGCC
GTACTCGGCT CGCTGCTCGC GCAGATCGAT GCGACTATCG TGAACGTATC GCTGTCGAAT
CTCGCGCAGG ATCTTCATGC CACGTTGCCG GCCATTCAGT GGGTGACGAG CGGATATCTG
CTCGCACTCA CGCTGGTGCT GCCGCTCAAT GGCTGGCTGA TCGACCGGAT TGGCGGCAAG
GCGCTCTACC TCTGGTGCTT CTCGTTGTTC ACGCTCAGTT CACTGCTGTG CAGCCTTGCA
TGGTCGGCTG ACGCGCTGAT CGGCTTCCGT CTGTTGCAGG GCGCGAGCGG CGGTCTGCTC
GCACCGATGG CGCAGTTGAT GATGAAGCGC GCGGCGGGTA ACCAGTTCAC ACGCGTGGCC
GGCTACGCGA CAGTGCCGAT CCTGTTGGGG CCATTGCTCG GGCCGGTGAT CGCCGGCGTC
ATTCTTCGTC ATGCGTCATG GCGTTGGCTG TTTCTCGTCA ACCTGCCGGT CGGCGTGCTG
GCGCTCGTGT TGTCGATGCT GTTCCTGCCC GACGATCGTG AGGATCTTCG GCCGCGCGAG
CTGGATTGGC TCGGTCTGGT CCTGCTGTCG CCTGGACTCG CATTGATATT GTTCGGCGCA
GAGCGCGTCC GGCAGCATGT GGGCATCGTA GCGATGGTTG CGGGCATCGT CCTGCTCGTC
TTTTTTTTGC GGGTGGAAGC GCGCAAGGCT GAGCGGGCGC TGATCGATCT GAGCCAGTTT
CATAACCACA CGTTCGCGGT GGCGGCGGCT GTGCAGTTCC TGTCGAACGG TGTGATGTTC
GCAGGGCAGA TGTTGATTCC GCTCTTTCTC ATCCAGGCGT GGGGCCGTTC TCCCGTTGAG
ATGGGCTGGC TGCTCGCGCC GCTCGGCCTG GGAATGATGA TCGCGTTTCC GCTGCTCGGT
TTTCTGACGG GGCGCTTCGG CGGTCGTGCG GTCGCGACCG GTGGCGCGTT GCTGTCGCTT
GCCGCGACGT TGATGCTGGC GTGGCTCGCT TCACGTCCGC TGCAGGTGGC AACGCTCGTG
CCGGCGCTGT TCGTGCGCGG CGCCGGGCTC GGAGCGACTG CGCTGCCGGC GATGTCGGCG
GCCTACGCGT CGGTCGAGCA GCGCAATCTG CCAATGGCGA CCACGACGCT CAACATCCTG
CAGCGGCTCG GTGGGCCGAC CTTGACGACG CTCTGCGCAC TGGTGTTGGC GGAGTTGCTC
GGCGCGCACC CGACGCTTGA TGGGTTGAAC GCGTGGGAGG TAACGTTTCT GCTGCTTGCC
ATGCTGCATG CGTTGATGGC GGTGACGGCG GTGCGGCTGC CGGGGCATGT GAGCGGGAGA
GGATGA
|
|---|
| Protein sequence | MSAAQRDHLD PLVWKITTVA VLGSLLAQID ATIVNVSLSN LAQDLHATLP AIQWVTSGYL
LALTLVLPLN GWLIDRIGGK ALYLWCFSLF TLSSLLCSLA WSADALIGFR LLQGASGGLL
APMAQLMMKR AAGNQFTRVA GYATVPILLG PLLGPVIAGV ILRHASWRWL FLVNLPVGVL
ALVLSMLFLP DDREDLRPRE LDWLGLVLLS PGLALILFGA ERVRQHVGIV AMVAGIVLLV
FFLRVEARKA ERALIDLSQF HNHTFAVAAA VQFLSNGVMF AGQMLIPLFL IQAWGRSPVE
MGWLLAPLGL GMMIAFPLLG FLTGRFGGRA VATGGALLSL AATLMLAWLA SRPLQVATLV
PALFVRGAGL GATALPAMSA AYASVEQRNL PMATTTLNIL QRLGGPTLTT LCALVLAELL
GAHPTLDGLN AWEVTFLLLA MLHALMAVTA VRLPGHVSGR G
|
|---|
| |