Gene Bxe_C0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0172 
Symbol 
ID4009720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp188144 
End bp189538 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content67% 
IMG OID637952827 
ProductCPA1 family Na(+)/H(+) antiporter 
Protein accessionYP_555447 
Protein GI91780240 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGGGC TGCCGTGCAG ATGGGCGGCC GGCCCGTTCC CATTCCCTCT ACCCAACCTC 
GATATGATCG CGGAAGCCGT CTGGTTCCTG CTGATTGGCG GGCTGCTCAC GTTCATCGCG
CTCGCGCGCG GACCGATCGG GCGTCTGCCG CTGACCGGCG CCATGATCTA TCTCGTCGTC
GGGGTGTTCA TCGGGCCGGC TTTCGCGGGC CTCGTCGACG TCGACCTCAC GCGCGATCCG
GGCCTCGTGC GCATGCTCGC CGAAGTGGGT CTCGTCATCT CGCTGTTCGC GATCGGCATG
CATCTGCGCG TGCCGCTGCG CGACCGGCTG TGGATGCTGC CGCTGCGGCT CGGCGGTCCC
GCGATGCTCG TCACCATTGC ATTGATGACC GCTTTCGTGA TGCTCGTGGA GGGCCGCCCG
CTCGGCACGG CGCTTTTTCT CGCGGCCACG CTCGCGCCAA CCGACCCGGT CCTCGCGAAC
GAACTGCGTG TGAAAGAGGC TGGCGACGAC GAACCGGTGC GCTTCGCGCT ATCCGGCGAA
GGCGGCCTCA ACGATGGCGC GGCCTATCCG TTCGCGATGC TGGGCCTTGC ATTGGTCGGG
GCGCCACAGT TCGGAACCGG CGACGGCTTG ACGTTCGCGG GATCGGTGGG ATGGGGCGTC
GGTAGTGCGC TCGCGATCGG CTGGGTGCTC GCAGTCGTGT TCGTGAAGAC GGTGTTCTAT
CTGCGCACGC GTTATGGCGA AGCCATCGGC CTCGACGGCT TTCTCGCGCT CGGCCTGATG
TCGGCCTCGT ACGGCGCGGC GCTGATCGTG CATGCGTATG CTTTCGTCGC GGTGTTTGCC
GCGGGCGTCG CGTTGCGTCA CGAGGAGTTG CGCGCGACTG GCGACACCAA CCCGGCGGAA
GTGCTGGAAA ACGTCGAGCG CGGCGCGCGC GTCGACGCGG CCAAAGACCC CGAGCGCGCG
CACGCCTATC TGGCCGAAGC CATGATGGGA TTCACGCTCG AGATGGAGCG CATCGCGGAG
TTGTCGCTGA TGCTGCTGAT CGGCTGCGTC GTGTCCGCGC ATTGGCGCGA GATGCTCGAC
GCAAAGGCAG TGTTGCCCGC GCTCTTTCTG TTCTTCGTCG CGCGTCCGCT GTCGGTCTAT
ACGGCGATGG CGGGTTCGCA AGCCGATGGC GGTCAGAAGC GGATCATCGG CTGGATGGGC
ATACGCGGCG TCGGCGCGTT CTATTACGCC GTGCTCGGCA TCCAGGAAGC CGGCGATACG
CTGCGAGCGC TGCTGCCGGC GGTACTCGAT ACGATCGTGC TGTCGGTGTT GGTGCACGGA
TCGACCGCGG GGTATGCGTT GCAGCGGTAT TTCAGGCGGT ATCGCGAGCC GAAGGAGCAG
GAGCAGCGGG CCTGA
 
Protein sequence
MQGLPCRWAA GPFPFPLPNL DMIAEAVWFL LIGGLLTFIA LARGPIGRLP LTGAMIYLVV 
GVFIGPAFAG LVDVDLTRDP GLVRMLAEVG LVISLFAIGM HLRVPLRDRL WMLPLRLGGP
AMLVTIALMT AFVMLVEGRP LGTALFLAAT LAPTDPVLAN ELRVKEAGDD EPVRFALSGE
GGLNDGAAYP FAMLGLALVG APQFGTGDGL TFAGSVGWGV GSALAIGWVL AVVFVKTVFY
LRTRYGEAIG LDGFLALGLM SASYGAALIV HAYAFVAVFA AGVALRHEEL RATGDTNPAE
VLENVERGAR VDAAKDPERA HAYLAEAMMG FTLEMERIAE LSLMLLIGCV VSAHWREMLD
AKAVLPALFL FFVARPLSVY TAMAGSQADG GQKRIIGWMG IRGVGAFYYA VLGIQEAGDT
LRALLPAVLD TIVLSVLVHG STAGYALQRY FRRYREPKEQ EQRA