Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2361 |
Symbol | |
ID | 4007143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 770698 |
End bp | 771747 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637950348 |
Product | OmpC family outer membrane porin |
Protein accession | YP_552978 |
Protein GI | 91777770 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.149156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.52718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA TGGCTTTGGC TTGTTCCGCA GCACTCGTTG CACTTGGCAC CGTGACAGTG ACGCCGGCCC GGGCCGAGGT CACGCTGTAC GGCATTCTCG ATACGTACCT GGGTTATACG AACGCAGGCG GCAAGGGCGC GCAGACCGCG ATGCAGAGCG GCGGTCTGTC GGCAAGCCGC GTGGGGATCA GAGGAAGCGA AGATCTCGGC GGCGGCCTGC GTGCTACCTT CGATCTCGAG AACGGCATTC TCACGAACTC CGGCGCGGCG ACGGATTCCA CGCTCGCCTT CAGCCGCAGT GCGTGGGTTG GTCTCGGCAC GCCGTATGGT GAATTCCGTT TCGGACGCCA GAACTCGGTG CTGCTGCTGA TGCACAGCAA GTTCGACGCG TTCTCCGGCG GAACGTACGG CTCGTTTCTT CACAACGCAT CGACGTTCGT GTTCCGCTAC GACAACATGA TCACGTACTG GTCGCCGAAC ATCGCCGGGT TCACATTCTC CGCGGGTGCG AGCCTGGGCG GCCAGACGTC GCCGCATGAC GCGTTGAATG CGTACGTCGG CTCGATCGAT TACCAGCGCG GCCCCTTGTA CCTCGGCGTC AGCCACGCGG AACAGAATGG CGCGAACGGA AAAATCAATA CGAAGACGAC GTTTGCCGGT GGCAGTTATC AGTTCGGCAG TTTGACGGGT TATTTCGGCT ATTACCGCGG CAACAACCTC GGCTCGAATA TCTCAACCAA TGTCGAAGGC AAATATCACA GCGTCTATTC GCTATCGACG ACCTACAGCG TCACGCCGGC GTTACGGCTC GCGGCCGGCG TCGGCTACGC GCAGGATAGT TCAGGCCAGC ATAACAATGC GGGAGAAGTG AGCGTTGGCG CGTTCTACAG CTTCAGCAAG CGGACACTGG TCTATGGAAC GCTTGAACGG CTCGTGAACC GCCACGGCGC GACCTATGCG CTGATCGCCA ATGGGCCCAT CACACCGAAC ACGCCGACGC GTGGAGAAGG CGTGACGGGT GCGCAGCTCG GGATACTGCA TTCGTTCTGA
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Protein sequence | MRKMALACSA ALVALGTVTV TPARAEVTLY GILDTYLGYT NAGGKGAQTA MQSGGLSASR VGIRGSEDLG GGLRATFDLE NGILTNSGAA TDSTLAFSRS AWVGLGTPYG EFRFGRQNSV LLLMHSKFDA FSGGTYGSFL HNASTFVFRY DNMITYWSPN IAGFTFSAGA SLGGQTSPHD ALNAYVGSID YQRGPLYLGV SHAEQNGANG KINTKTTFAG GSYQFGSLTG YFGYYRGNNL GSNISTNVEG KYHSVYSLST TYSVTPALRL AAGVGYAQDS SGQHNNAGEV SVGAFYSFSK RTLVYGTLER LVNRHGATYA LIANGPITPN TPTRGEGVTG AQLGILHSF
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