Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2003 |
Symbol | |
ID | 4007501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1169513 |
End bp | 1171558 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637950702 |
Product | hypothetical protein |
Protein accession | YP_553332 |
Protein GI | 91778124 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000248877 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0352178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAATC GTTATGCCAG AAACGGCCGA TCGCGCACGA TGGAGCACGC CTACGTTCAC CTCCTGCATC TGCTGGCCGG CCACCCGGGC TGGACACTCA CGGTCGTTTT CCTTGCGGCC TTCCTGGAGG CCATCGCCGT TATCGGCACC TTCATTCCGG GCAGCACCGC GATGTTCCTG GCCGGCGCGC TGACCGGCAC CGGCTCGCTC AGCCTCGGCT GGGTATTCGT GTGGGCAATC GCGGGGGCGA TCGCCGGCGA CGGCATGAGC TTCTGGCTCG GCAGCCGCTA CAAGCACCGG ATCGTCCAGT TCTGGCCGTT CTGCAAACAT CCCGAAGTGC TCGAAGCAGG CCACCGCTTC TTTCGCAAAC ATGGCGCCAA GAGCGTCGTG CTGGCGCGCT TCATCGGTCC GTTGCGCGCC ATCGTGCCGG TAGTGGCGGG CATGCTCGGC ATGCCGCCGC TGCGTTTCTA CGGCATGAAC GTGCTGTCGG CGCTGATCTG GGCGCCCGCC CATATCCTGC CGGGCATGAT ATTCGGCGCC TCGGTGCTGC TGGCGGGCGC GGTGTCGTTC CGGCTGGTCG TCATCATCGC GTTGCTGGTG GGGATTGTCT GGTTGAGCTT TCGTGCCGCG CGGGTTCTGC TCTCGCACGC CAATGTGTGG TCGACCGCCG CCGGCCGCCA GGTGGGAAGC TGGGCCTGCC GCCACCCTGG TCCGTTCGGC CGCTTCGCGC GCAAGATGCT CGACCCGCGG ACGCCGGACG CCGGCAGCAT CCTGCTGACG TCGCTGGTCG TGCTCGTATC CGGCGCGCTG TTTTTCGGCG TGCTCGACGA CGTCATCAGC GGCGATCCGC TGACGCAAGT GGACCTCTCG GTCTATCACT TCCTGCGCTC GGTACGCACG CCCTGGAGCG ATACGGTTCT CGCGGGTCTG TCGACGCTCG GCAGCAACAT GACGCTCATG GCGCTGATCG TGACGGTCGT CGTGTGGATG CTGCTCGAAC GGCGCTGGCG CACCATCGGT TACTGGCTCG CGGCCGTTGT GTTCTCCCAG TTGCTGATCT TCGTGCTGCA ATTCGCGATG CACCGCGCGC CGCCCAACGA ACTGATGGTC GGCGCCTATG TGTTTCCGAG CAATCACGTC GCCGCGACCG TCATCGTGTA CGGCTTCCTT GCGTTTCTGC TGGCGCGCCG GGTCGGCATG CTCGAAGGGG TGCTGGTGGC GGCCGCGAGC ACGATCGTGG TGATCGTGGT CGCGCTCGCG GGACTGTACT TCGGCAGGTA CTGGGTGTCC GATGCGATCG GCGGCGCCGC GCTCGCGTAC GTCTGGGTGG CGATCGTTGC GTTGACAGCG ATGTGGCGGC ACCCGGAGGC GCCGCCCGAG CGCACGTTCA TGCCCGTGGT GGTGCTGCTG GTCATGCTGG TCAGCGTGGG CGTGCAACTC GGCGTCGCCA TGCCCGCGCC GCCGCCGGAC ACCGCGCTGC TTCCGCCGCC CGTGCTGGTG ACGCAGGCGC AATGGACGCT TTCCACGTGG AAGCATCTGC CCTGCTACCG CTCGGATATG GGCGGCGACC GCAAGGAGCC GCTCACGCTA CAGTGGGCCT CGAACCTCGA TTCGATCCGC GGCCGGTTGC GCGCCCAGGG CTGGGTCGAG GGAACGGACG TGTCGGCGCA CAGCCTGCTC TCGCTCGCCT CGCCCAACGT CGCGGCGGTG TCGCTGCCGG TATTGCCGAA GCTGAACAAC GGCGTGCCGT CGTCGCTGGT CTTCATGCGT CCGGGCAACA CGCGCGACGA GCGCGACGTG CTGCGCTTCT GGCCCAGCGG TTACGCGGTG GCGACAGGCA CCTCCACCCA ACCGTTGTGG GTGGGCGCTT TCGCGCACGA ACGGCTGTCC CGCGCATCCT GGCCGATCAA CATTCTGCGG GTCGACCGGG AGATGACCTC GGTCGATGCA CACGCCCGAT CCAGCGCCGG TCTCGACGCG GCGATCGTCG CCCGGGTAAG TTGCCACGGT GTGCCGGTGT CGCTGCTTGC CTCGCCGGTG GAGTGA
|
Protein sequence | MINRYARNGR SRTMEHAYVH LLHLLAGHPG WTLTVVFLAA FLEAIAVIGT FIPGSTAMFL AGALTGTGSL SLGWVFVWAI AGAIAGDGMS FWLGSRYKHR IVQFWPFCKH PEVLEAGHRF FRKHGAKSVV LARFIGPLRA IVPVVAGMLG MPPLRFYGMN VLSALIWAPA HILPGMIFGA SVLLAGAVSF RLVVIIALLV GIVWLSFRAA RVLLSHANVW STAAGRQVGS WACRHPGPFG RFARKMLDPR TPDAGSILLT SLVVLVSGAL FFGVLDDVIS GDPLTQVDLS VYHFLRSVRT PWSDTVLAGL STLGSNMTLM ALIVTVVVWM LLERRWRTIG YWLAAVVFSQ LLIFVLQFAM HRAPPNELMV GAYVFPSNHV AATVIVYGFL AFLLARRVGM LEGVLVAAAS TIVVIVVALA GLYFGRYWVS DAIGGAALAY VWVAIVALTA MWRHPEAPPE RTFMPVVVLL VMLVSVGVQL GVAMPAPPPD TALLPPPVLV TQAQWTLSTW KHLPCYRSDM GGDRKEPLTL QWASNLDSIR GRLRAQGWVE GTDVSAHSLL SLASPNVAAV SLPVLPKLNN GVPSSLVFMR PGNTRDERDV LRFWPSGYAV ATGTSTQPLW VGAFAHERLS RASWPINILR VDREMTSVDA HARSSAGLDA AIVARVSCHG VPVSLLASPV E
|
| |