Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1413 |
Symbol | |
ID | 4008098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1807808 |
End bp | 1808947 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637951281 |
Product | OmpC family outer membrane porin |
Protein accession | YP_553901 |
Protein GI | 91778693 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 7.59024e-18 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.238821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC AGCTTCTTGG TATGACCGCA TTGATGGCGG CGACGCTATC GTGCCATGCA CAAAGTTCGG TCACGCTTTA TGGCGCGCTG GACGACGGCC TGACCTTCAC CAACAATCAG GGTGGCCATC ACAACTACCA GGCGTCGAAC GGCGCGCTGG GCAGCAGCAA GTGGGGCTTC CTGATCAACG AGGATCTGGG CGGCGGCTAC AGTGCGATTG CACGCCTCGA AAACGGGTTC GACATCAATA CCGGCAAATT CAATAACGGC GGACGCCTGT TCGGCCGGCA ATCCTACGTG GGTTTGGGCT CGCCGTACGG GACGCTGCTG ATGGGGCGCC AATACGATCT CGTCCTCGAT TCGCTGCTGC CGCTCTCGGC GTCGAGCCGC TTTGGCGGCA TTCTGGCCGC GCACGCCGCG GACGTGGACA ACGTCTGGGG CGATTACTCG CTGAGCAACT CCATCAAATA CCTCTCGCCG ACTTATGCCG GTTTCAAACT GTCCGCACTG TTCAGCTTCG GTGGCGTGGC CGGCGACTTT TCCAACAGCA AGAAGGAGTC GGTCAGCCTC GTCTATACGA ACAGTGCGTT GAGCGCGAGC GCGGTGTTCT CGCGAATCAA TAACCCGGCA ACATCGATCT ACGACGCGAC CGCCAATCCC GTTGCGGGAA CGGCGTTCGC CAATCCGATC ACGAATCCGA CCTTTAGCGG CTACACGTCG GCGCACACGT TGCAGGTGGC CGGCGCGGGC GTCAATTACC GCATCGGTGC CGCATTGCTG GGTTTCACTT ACACCAACAC CCGTTTCGAG GACGTGGTCC GGACTTCGTC GACGCCATTT TCCGGAACGG CGACGTTCAA CAATTTCGAA GCACTGGCCA CGTATAACGT TACGCCGGCG TTGCTCCTCG GCGCGTCGTA CGACTACACC AAGGCGGAAT CCGCTAAATA TGGGCAGCTC AATCTGGGCA CTCAGTATTC GCTCTCCAAA CGAACGCTCG TATATGCGAC CACCTCGTGG GAGCACGCAA CGGGGACCGA CTCCACAGGC AAACAGGCCG TGGCCGCGCT TTCTTTCCTG ACGCCTTCTT CGACCGGAAA TCAGGTCGCC GTACGGGTGG GTGTACGCCA CAGTTTCTGA
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Protein sequence | MKKQLLGMTA LMAATLSCHA QSSVTLYGAL DDGLTFTNNQ GGHHNYQASN GALGSSKWGF LINEDLGGGY SAIARLENGF DINTGKFNNG GRLFGRQSYV GLGSPYGTLL MGRQYDLVLD SLLPLSASSR FGGILAAHAA DVDNVWGDYS LSNSIKYLSP TYAGFKLSAL FSFGGVAGDF SNSKKESVSL VYTNSALSAS AVFSRINNPA TSIYDATANP VAGTAFANPI TNPTFSGYTS AHTLQVAGAG VNYRIGAALL GFTYTNTRFE DVVRTSSTPF SGTATFNNFE ALATYNVTPA LLLGASYDYT KAESAKYGQL NLGTQYSLSK RTLVYATTSW EHATGTDSTG KQAVAALSFL TPSSTGNQVA VRVGVRHSF
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