Gene Bxe_B1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1235 
Symbol 
ID4008276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2000004 
End bp2001146 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content68% 
IMG OID637951451 
Productputative exonuclease 
Protein accessionYP_554071 
Protein GI91778863 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0402461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.467489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGGT TTCTGCACAC CGCGGACTGG CAGATAGGCA CGCAATTCGG CCAGTTCGAA 
CCGGACGAGG CGGCGCACCT TGCCGAAGCG CGCTTCGAGA CCGTGCGCCG GATCGCCGGA
GAAGCCGCCG CACGCAAGGT CGACGCCGTG CTCGTGGCCG GCGACGTATT CGATCTGCAA
ACCGTCTCGG ACACGGTAAT CCGCCGTCTG TTCGGTGCGC TGCAAGGCTT CACCGGGCCG
TGGATCATGT TGCCGGGCAA TCACGACGCC GCGCTCGTCG AGAGCGTCTG GACGCGTGCC
CAGCGCCTGA ACTGCATCGC GCCGAATGTG CGCGTGGTGC TCGAACCCGG CGTGGTGCTG
CTCGACGCCT GCCGTTGCGC GCTGCTGTGC GCGCCGCTTA CGCAGCGCAT CACGTATGAC
GACACCACCG GGTTCTTCGA TACCACGGAG ACGCCGGCCG GCTATCACCG CGTCGGACTC
GCGCACGGCA GTGTGAGCGG CATTCTGCAG GAAGGCATCG ACTCGTCCAA TCCGATCGCG
CCCACGCGTG CCGCGAGCGC GCGGCTGGAC TATCTGGCGC TCGGCGACTG GCACGGCCAT
CTGCGCGTCG ACGAGCGCAC CTGGTACGCC GGCACTCATG AGCAGGACCG TTTCCGCGCC
AACGATCCGG GCTTCATGCT CGACGTCACG CTGCGGGAGC CGGGCGCGCC GCCGGAGGTC
GAGCCGGTGC GGGTCGGGCA ATATCAATGG CATCGCTGGG ACGAAACCAT TGCCGTGCCG
ACCGATGTGG ATTCGCTCAA GGCGCGTCTT GCCAAGTTGG GTAGCCACGA CGTGCTGCGC
GTCACCGTCG GCGGTACGGC GGCGCTCGCC GACGCGGAAG CGATCCACGT CGCGGTGGAA
GAAGCCCGCG CCCGTGTGCG GGCCTTGCGC GTCGACCTGA GCGGCCTGCA AGTGCTGCCC
ACCGCCGACG ATCTCGCCGA ACTCGGCGCG CAAAGCGGTT ATCTCGCGAA AGTGGTGGCG
CGTCTGCGCG GCTTGCAGGA AGATCCGCAG TCCGACCCGC AGGCGGTCAG GCGCGCGGCG
GAGGCGTTGT TGCTGCTGGC GCGTTTTCAA CGTGAATTGC CGCGCGAAGC GAGGTCCGCA
TGA
 
Protein sequence
MIRFLHTADW QIGTQFGQFE PDEAAHLAEA RFETVRRIAG EAAARKVDAV LVAGDVFDLQ 
TVSDTVIRRL FGALQGFTGP WIMLPGNHDA ALVESVWTRA QRLNCIAPNV RVVLEPGVVL
LDACRCALLC APLTQRITYD DTTGFFDTTE TPAGYHRVGL AHGSVSGILQ EGIDSSNPIA
PTRAASARLD YLALGDWHGH LRVDERTWYA GTHEQDRFRA NDPGFMLDVT LREPGAPPEV
EPVRVGQYQW HRWDETIAVP TDVDSLKARL AKLGSHDVLR VTVGGTAALA DAEAIHVAVE
EARARVRALR VDLSGLQVLP TADDLAELGA QSGYLAKVVA RLRGLQEDPQ SDPQAVRRAA
EALLLLARFQ RELPREARSA