| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1032 |
|---|
| Symbol | |
|---|
| ID | 4008479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2223435 |
|---|
| End bp | 2224436 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637951652 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_554272 |
|---|
| Protein GI | 91779064 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.277484 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC ACTCAGCAAC TGTCGCACTG GTCAATCGGC TCAAGTTCAA ACACCTCGCG
CTGCTCGTCG CGCTCGACGA CGCCCGCAAT CTCCATCAGG CCGCCGAGGC CGTCAACGTG
GCCCAGCCAA GCGCGAGCCG CATGCTCGGC GATATCGAGG AGGCGTTCGG CTTCCTGCTG
TTCGAGCGCA ACGCGCGCGG TATGACGCCC ACGCCGCTCG GCGTCGTCAC GCTGGCCTAC
GCGCGGCGCG CGCTGGCCGA ACTGACCCGT TTCGCCGAAG ACCTCGAAGT CAAGCGACGC
GGCGGTCATG GGCAACTGAC GGTCGGCGCG ATCATGGGCG CCGCGCCCGA TCTGCTGGCT
ATGGCAGTCG CCGCGCTGAA AACCGAAAGC CCGCTGCTGA ATGTGCGCAT TCTGGGCGAA
ACGAGCGATC AGGTCGTGCA ATTGCTGCAT CGCCGCGAAG TCGATCTGGC GCTGGGGCGC
CTCACCAGTC CGCTGCAACA CAACGATTTC AGTTTCGAGC CGCTCGCACG CGAGACGCTG
CTGCTGGTCG TGCGCTCGGT GCATCCGCTC GCGCAGCGCG CGCGCCTTAC CCTGCGTGAG
CTGATCGACT GGCCGTGGGT GGCGCAGCCT GTCACCAGTC CGGCGCGTGT GCTTTTCGAA
GAGGAACTCG CGCGTGCGGG ACTGGCCACG CCGGTGAACC TGACCGAATG CGCGTCGATC
TTCGCAACGC TGCAACTGCT CGAGAATTAC GATGCGGTGG CAATGCTGCC CGAATCCGTG
GTGCGCGATC ATTTGCGCGG CAAACTGCTG GTTGCGTTGC CGCTCGAAAT CGGCAAGAGC
CTGTCGGGCT TCGGCATTCT CACGCGCAAG GAAGAACCGC TGGCTGAACC GGCGCTGCGC
TTCATCGACC TGTTGCGCGG TTTCTCGCAC AAGCTCAAGC GCGACGACAC GGCCGCCGCC
GCATCCAGTT CGCTGATCGC GGCTTCGGCT CCGGTGAACT GA
|
|---|
| Protein sequence | MSQHSATVAL VNRLKFKHLA LLVALDDARN LHQAAEAVNV AQPSASRMLG DIEEAFGFLL
FERNARGMTP TPLGVVTLAY ARRALAELTR FAEDLEVKRR GGHGQLTVGA IMGAAPDLLA
MAVAALKTES PLLNVRILGE TSDQVVQLLH RREVDLALGR LTSPLQHNDF SFEPLARETL
LLVVRSVHPL AQRARLTLRE LIDWPWVAQP VTSPARVLFE EELARAGLAT PVNLTECASI
FATLQLLENY DAVAMLPESV VRDHLRGKLL VALPLEIGKS LSGFGILTRK EEPLAEPALR
FIDLLRGFSH KLKRDDTAAA ASSSLIAASA PVN
|
|---|
| |