| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1009 |
|---|
| Symbol | |
|---|
| ID | 4008502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2244352 |
|---|
| End bp | 2245455 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637951675 |
|---|
| Product | putative fatty acid desaturase |
|---|
| Protein accession | YP_554295 |
|---|
| Protein GI | 91779087 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.304323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.123279 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTT ACCTCGACGA CACGCAACGC AACATGCTCT CGCGCCTCGC GGCAAGCTGG
ACATGGCGCA CGCAATGGCC GACGTGGGCG CTGATCGCGG CGATCTACGG CGGATGGTTC
AGCGTGGCGA CACATGCGCG CGACCTGGGT TTACCCGTCA CTACGCTTCT GCTGGCTTTG
CTCGGCACGT GGTACATGTC GCTGCAACAT GAACTGCTGC ACGGTCATCC TACGCGATCG
CCGCTCGTCA ATGCGCTGCT CGGTTTCGCG CCGCTCGCCG TGTGCTTTCC GTACGGCATC
TATCGCGATT CCCATCTTCA GCATCACGAC GATCCGCATC TCACGCATCC CGAGCGCGAC
CCGGAGAGTT ACTTTGTCGG CAGGTTCGCG TGGCAACGCG CGGGCTGGGC GATTCGCGCG
CTGCTGACCT TCCGCAATAC GTTTGTAGGC CGCCTGCTGG TTGGGCCTGC GTTCGCGATT
GCCGCGACCG GCGTGGCGGC GCTGCGTCGA ATCAAAGGCG GTGATTGGCG CGATGTCCCG
GTGTGGCTTG CGCACTTTGC CGCACTCGCC GCGCTTACCG CCTGGCTGCA ACATGTTTGC
GCGATCCCGG CGTGGGTTTT TATTGTCGGC GCGGGTTATG GTTCGCTGTC GGTGGGTTCG
GTCAGGTCGT TTCAGGAACA CCGCGCGGCG CAGGCGCACG AGCATCGCAC CGTCATCAAT
GAAGCGGCGT GGTTCTGGCG CCTGCTGTTT CTGAACAACA ACTATCATCT CGTTCATCAC
GACTTGCCTC ATGTCCCCTG GTTCGCACTA CGGAGGGTTT ATGAGGCGTC TCGTGAGCAA
TACGTGGCGC GCTCGGGAGG TTTTCTCGTG CGGGGTTATA GCGAATGGCT GCGGCTTTAT
GCACTCGCCG CCGTCGCTCA TCCGGTTTAT GAGGATGCGT CGGGGTTGAT TCAACATAAT
CCGTCCGCTC GCGAGCGTTT TGCCGAGCAC ACCACTCGCC AATGGATGTC ATCGCCGCAG
ACGGGCACTT CCCGCCACAA TCAGCGCTCG GGCGGCCCGT CAGAAGCCAG CACGGCCACA
CCGTCCGCCG CCCTCACCCC CTGA
|
|---|
| Protein sequence | MAIYLDDTQR NMLSRLAASW TWRTQWPTWA LIAAIYGGWF SVATHARDLG LPVTTLLLAL
LGTWYMSLQH ELLHGHPTRS PLVNALLGFA PLAVCFPYGI YRDSHLQHHD DPHLTHPERD
PESYFVGRFA WQRAGWAIRA LLTFRNTFVG RLLVGPAFAI AATGVAALRR IKGGDWRDVP
VWLAHFAALA ALTAWLQHVC AIPAWVFIVG AGYGSLSVGS VRSFQEHRAA QAHEHRTVIN
EAAWFWRLLF LNNNYHLVHH DLPHVPWFAL RRVYEASREQ YVARSGGFLV RGYSEWLRLY
ALAAVAHPVY EDASGLIQHN PSARERFAEH TTRQWMSSPQ TGTSRHNQRS GGPSEASTAT
PSAALTP
|
|---|
| |