| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0545 |
|---|
| Symbol | |
|---|
| ID | 4008966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2759603 |
|---|
| End bp | 2760661 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637952133 |
|---|
| Product | OmpC family outer membrane porin |
|---|
| Protein accession | YP_554753 |
|---|
| Protein GI | 91779545 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.674895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCACAGG TTGCCACCTG GCGTCGTCGT CTGGTCTGGT GCGTCGGCGG CGCGGCGCTG
CTATGTTGCG CGCCGAGCCT CGCGGCACAG AGCGCGAGCA CGGGCACGGG CTCCGTCACG
CTATACGGCG TGCTGGACAC CAGCCTCGAA ATCACCGATC CCGGCTCCGG GTGGACACCG
CGTCTGGACT CGGGTGCCTA TCGCGGTTCG CGGATCGGCT TGCGCGGCAG CGAGCCGCTC
GGCGCCGGCA CCGATCTGGT GTTCACGCTG GAAAACGGCT TCAGTTCGAC CGACGGCTCG
CTTCAGAGTC CCGGTCTTCT GTTCAACCGC CAGGCGTGGG TGGGCGCCAG GGGCGCATGG
GGCGAGATGC GTTTCGGCCG GCAATACTCG CCTATCTACA TCCCGTTCAA GGGCGATCTC
GACGCGTTCG GCGCCGGCAC GATTGCGTCC GGACTCAACA ACCTGTCGAA GATCACGCCT
TACGCCAGTA ACGCGATCAC GTATCTTTCG CCGGTCGTCG GCGGGTTCAG CGGCACCGTC
ATGATGGCCA CGCGCGATCC GGCCGAGAGC GACGGCAACG GCATCGACGG CTACTACGTT
ACCGCTTCGT ATCAGATCGA CGAGCTCAGG CTGCTATACG CGCGGCAGCA GACTCACGGC
GCGGGCGCAC TGCGCGCCAA TCTCGGCGGC GCGACGTACG CGGTGAATAA AGTGCGCGTG
TGGCTCGCCT TCTTCAATGG CGATGGCGGC ATGCCGCTCT ATCATGGCGC GGGCGGCGCG
CTCTCGGCGC AATACAGCTT TTCTTCGGCC ACGCGCGCGT CGGTGGGCTA TGCGCACGTG
CGCGACTTCA CCGGCGCAGG CGCGAGCGCG GATCAGTTCA GCCTGGCATT CGAACACAAC
TTTTCTGCCA CCTTGCTGTT CTATTTCAGC GCAGCCTATC TGTCGAATCA CGATGGCGCC
GGCTTCACCC TGCGCGGCGT CAACGTGACC GGGCTGCCGG TCGCCTATCC GGGCGCGCCG
GTTGCGGGCG TGCAGTTCGG CGTGGTCGAG CGATTCTAG
|
|---|
| Protein sequence | MAQVATWRRR LVWCVGGAAL LCCAPSLAAQ SASTGTGSVT LYGVLDTSLE ITDPGSGWTP
RLDSGAYRGS RIGLRGSEPL GAGTDLVFTL ENGFSSTDGS LQSPGLLFNR QAWVGARGAW
GEMRFGRQYS PIYIPFKGDL DAFGAGTIAS GLNNLSKITP YASNAITYLS PVVGGFSGTV
MMATRDPAES DGNGIDGYYV TASYQIDELR LLYARQQTHG AGALRANLGG ATYAVNKVRV
WLAFFNGDGG MPLYHGAGGA LSAQYSFSSA TRASVGYAHV RDFTGAGASA DQFSLAFEHN
FSATLLFYFS AAYLSNHDGA GFTLRGVNVT GLPVAYPGAP VAGVQFGVVE RF
|
|---|
| |