Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0334 |
Symbol | |
ID | 4009177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 3003441 |
End bp | 3004214 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637952342 |
Product | putative spermidine synthase |
Protein accession | YP_554962 |
Protein GI | 91779754 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.737223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGA TAGGAAAGAG AAATCCGAAC AAGCCACTGG TGATTGAAAA CGACCAGGTG GTGTCGTTGT ACTTCGACGC GCGTGGCGTC CAGAGCACGA TGTTGCGGCA CGATCCGTAT GCGCTCGCGT TGGGTTACAC GCGGACCATG ATGGGCTTTC TGCTGTTCCG GCCGTCCCCA TGCCGTATTT CAATGATCGG TCTGGGCGGC GGTTCGCTGG CGAAATACTG CTATCGCCAT TTGCCGGACA CCGCCATCAC CGCGATCGAA ATCAATCCCG ATGTCATCGC GCTGCGTGAC CATTTTCACG TGCCGCGCGA CGACGGGCGT TTCACAGTGG TCTGCGCAGA TGGTGCGCAG TATGTCGCCG TGCCGGGTCA CCGGCCCGAC GTGCTGCTGG TGGATGGCTT CAATGCGGAC GGCCTGCCGG CTAGGTTGGG CAGCAGCGCG TTCTACGAAG CCTGTCGCCG CAGACTGAGC GACGACGGCG TGCTGGTGGC CAATCTGGTG ACGGACGAAC CCGACTTCCA CCGCTACCTC CGCGCGCTCT GGGAGGTGTT TGCCGGCGCG GTTGCTCTGG CGCCGTCTGA AGGTAGCGAG CACAACGTCA CCGTTTTTGC GTGGAAAGGA GCGGGTGGAC TTCCGTCATT CGCCGCAATG CTCGATCGGG CGCGCGCGCT TCAGGCGCGG CACGCGGTCA ATCTCCACGC CACGGCCACG CGCATCGAAT ACGGCAAAAA ATTCAACTGG AGTCGATATG GACGGACGGC TTGA
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Protein sequence | MLKIGKRNPN KPLVIENDQV VSLYFDARGV QSTMLRHDPY ALALGYTRTM MGFLLFRPSP CRISMIGLGG GSLAKYCYRH LPDTAITAIE INPDVIALRD HFHVPRDDGR FTVVCADGAQ YVAVPGHRPD VLLVDGFNAD GLPARLGSSA FYEACRRRLS DDGVLVANLV TDEPDFHRYL RALWEVFAGA VALAPSEGSE HNVTVFAWKG AGGLPSFAAM LDRARALQAR HAVNLHATAT RIEYGKKFNW SRYGRTA
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