Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0172 |
Symbol | |
ID | 4009339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 3175091 |
End bp | 3176164 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637952501 |
Product | OmpC family outer membrane porin |
Protein accession | YP_555121 |
Protein GI | 91779913 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCACA TCATTGCAGC CGGCTTGACG GCAATCTGCG CAACGACAGG CGCATGGGCG CAGAGCAGTG TGACGCTATA CGGCAGCCTG GATGCCGGTG TCGCGTATGT CAGCAATGTA GGTGGCCATT CGAAGTGGAT GGAAGAACAA GGCAACATGC AGCCTGACCG CTGGGGCCTG AAAGGCGTGG AAGATCTGGG CGGCGGCCTG AAGACGGTCT TCCAGCTGGA AAACGGCTTC TATACGAACA CCGGCGCGTT CGCGAAATCC GGTGTGCTGT TCAACCGTCA GGCGTTTGTC GGTTTGAGCT CGGACACGAT CGGCACGCTG ACGCTCGGTC ATCAGACGCC GTTCAGCTTC GACGTGCTGG GTCCGCTGAG CACGGCTTAT CTGGCGGCCA GCTGGTACGC GTTCCACCCG GGCAATATCG ACGAACTCGC CGACACCGGC GTGGTGCCGT TCGACAATTC GGTGAAATTC CGCTCGGCGA GTTTCAACGG CTTTCAGGTC GGCGCGATGA TGGGTCTCGG CAACACGACC AACTTCTCCA CGGGCAAGAC GTTGAGCTTT GCGCTTAGCT ACGCGAACGG TCCGTTCAAG GCCGGCGCGA CGTACGCGAA TGAGCACGAC CGCACGCCGT CGATCGTCAC CACGGGCATC AACAACTTCC AGGGCGTGGC GGCGGCCAAC TACACCGCGG ACAAGGTCGA AAACATGGGC GCGGGCGCGT CATACCAGTT CGGCAAGCTG CTGGTGCACG GTCTGTACAC GCGCGTGAAG CTGGAGTCGG CTGGGCACTC GGACACGTAT CAGAGCTACG ACGTCGGCGC GAATTATCAG TTCACGCCGT TCAATAGCGT CGCCGGCGGC GCTGCGACGA CGACGTTGGC GGGGCATCGC TGGACGCAGT TCGAGATCGG CGACATCTAC GCGCTGTCGA AGTCCACGCA GCTCTACGTG AACGCGCTGT ACGAGCGCGC GGGTTCGAAC ACGGATGCAG CGTTCTTTAC GGCGGGCGTG TCGAGCGGCC GGAACCAGAC GGTCATCCTG ACCGGCATCC ACCACTCGTT CTGA
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Protein sequence | MKHIIAAGLT AICATTGAWA QSSVTLYGSL DAGVAYVSNV GGHSKWMEEQ GNMQPDRWGL KGVEDLGGGL KTVFQLENGF YTNTGAFAKS GVLFNRQAFV GLSSDTIGTL TLGHQTPFSF DVLGPLSTAY LAASWYAFHP GNIDELADTG VVPFDNSVKF RSASFNGFQV GAMMGLGNTT NFSTGKTLSF ALSYANGPFK AGATYANEHD RTPSIVTTGI NNFQGVAAAN YTADKVENMG AGASYQFGKL LVHGLYTRVK LESAGHSDTY QSYDVGANYQ FTPFNSVAGG AATTTLAGHR WTQFEIGDIY ALSKSTQLYV NALYERAGSN TDAAFFTAGV SSGRNQTVIL TGIHHSF
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