Gene Bxe_A3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3417 
Symbol 
ID4002447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1154639 
End bp1155175 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID637946222 
ProductTonB protein 
Protein accessionYP_557620 
Protein GI91782414 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCC GCACACGTCA CCTTCGCCGC CTGCCCGGAC GCCGTGTTTC CCACGTCGGC 
GTATGGCCTG CTCACGTACG CGGCATGCTG CTCGCCGCGG CGCTGGGCGT GGTCATAGCC
GGCTGCACGA TCACGCCGCC GCCTCGTCCG GTCGTCTCGA CGCCCGCAGC CGCCCTCAAC
AGCGCGACGC TCGATCAGTA TCGCGATGCG GTGGCGCGAC GCATCATCGA ACGCAATCCG
TCTTATGTGT TGCGCGGCAC GCCGCAGGCC ATGCTGCGTT CGCTGGTCGT GGTGTCGTTC
ACGGTGGATC GTAACGGGCG CGTGGTGGAA TCGTCGGTGT ATCGCACCAA TGGCGACGAC
GAAGCCGAAA GCACGGCGCT CGCCACCTTG CGGCGCGCCG CGCCGCTGCC GCAACCGCCC
GGCAGATTGC TGAACGGCCG TGGCCAGTTG GAGCTCTTCG AAGACTGGCT CTTCAACGAC
GACGGCAAAT TCCAGCTCCG CGAGCTCGCC TCGCCGCAAG CGCAAACCAT CGACTGA
 
Protein sequence
MLTRTRHLRR LPGRRVSHVG VWPAHVRGML LAAALGVVIA GCTITPPPRP VVSTPAAALN 
SATLDQYRDA VARRIIERNP SYVLRGTPQA MLRSLVVVSF TVDRNGRVVE SSVYRTNGDD
EAESTALATL RRAAPLPQPP GRLLNGRGQL ELFEDWLFND DGKFQLRELA SPQAQTID