| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3384 |
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| Symbol | |
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| ID | 4002344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 1191623 |
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| End bp | 1193314 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637946255 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_557653 |
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| Protein GI | 91782447 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.667908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGA CAACCTTGCG CCAGGCAACC GGGCCGGTCA GCTTCTTGCT GATCGTACTG
GTTTGCTGGT TCGTGGCCGG CATGGTTGCG GACCGGATGG TACAGCAAGA GCTGGACGCG
GCCCTGCGTG CGCAGCGGCA AATGTCCACG TCGATCGTCG ACAACATGGC GGAGGTGATC
GCCAGCGACC TCGCAATGTC TCGCGCCATC CCCGCGACCA TGGCCGAAAT GGACGTGGTC
CAGCGTGCCC TGGTGCAATC TCAGAATTAT GCCGTGAACA GCGAGGCGAC GGAACCCGCC
TTGCGTGCCG CGTTACTGAA AGACGCGAAG ATGACCGCCG TGAGCAACTT CCTGCACGAC
GCGCAAGGTT TCTCCGGGCT CGACCAGATC TGGCTCGTCA ATGCGAACGG CATCTGCGTC
GCCTCGAGCA ACGCCGCGAA CAATCCGCTC GCGGCCGAGC GTTCTTTCGT CGGCACCGAC
ATGCGCGTGC GCGGCTATCT GACCAACGCG CTGCTCGGCG CGTTCTCCGA AGCCTATGGC
GTGGGCCGCA CGAGCGGCGA GCCGGGCATC TTCATCGCCG CGCCGGCATA TTCGGAGGGT
CTGCTGGTCG GCGTGGTCGT CGCCAAGGTC GGGATCGCGC GGCTGCGCCA CTGGGTCGCG
CATGCCGGCA CCTTCGTCAC CGACGAGAAC GGCGTCATCA TCATGGCGCA CAACAGCACG
CTCGAAGGCC GTGCGCTGCC GAACTCACGC GCCATGCAGA TGTCCCCCGC CGAGCGCAAG
CTCATCTATC AGCGCGATAC GTTTCCCGAC ATCCAGATCA GCGTCGATTC GCAAGTACGC
GAGCAGGCGC CGTGGGTGCC GACCGCCGTG GCCGGACAAC TGTTCGGCGT GTCCGAGCGC
CCCGTGCCGT CGCTCTATCA GGCGCGCGGC GGCCTGAACT CGGGGCTGTC GGCGCACCTG
ATCGATCCGC TCGCCGCCTG GCCGGAACTG CTGCGCAATC ACAAGCGCGA TCATCTGCTG
GTGTTCCTGA CGCTGGCCGG CACGGTCGCG CTGGCGTGGG TGATCACCGT CTCGTATGTG
CGCGAGCGGC GTCACCATCG CGCTACCCGC GATCTGGCCG AGCAACTGCA ATCGGCCAAC
ACGCTGCTGT CCGCGGAGGC CCGTCACGAC GCGCTGACCG GTGCGCTGTC GCGGCGCTAC
TTCCTCGACC TGCTGCGCCG TGAGATCGAG CGCGCGCATC TGGGCAACGA ACCGTTGTGC
ATGGCGATCG CCGACCTCGA CCACTTCAAG CAGATCAACG ACCGCTTCGG CCACGCTGCC
GGCGACCGCG CGCTCGAACA TTTCGTCGAC ACCTGCCGCG CCGAGTTGCG CGGCGCCGAT
GCGATCGGCC GGCTCGGCGG CGAAGAATTC GGGCTGCTGC TGCCGGCCAC GGACCTGGCC
GGCGGCCGCG AAGTCGTCGA GCGCCTGCGG CTGCGTCTGA AAGCGATGCC TTCGCCGAAG
CTGCCCGCTT CCGTGGGCTT AAGCGTGAGC ATCGGCATTA CCGAACTCTC CGCCGACGAC
CTGCCCGAAC GGATCATGAG CCGCGCCGAC ACCGCGCTTT ACGCGGCGAA ATCGGGCGGC
CGCGACCGCA CCGAAGCCCT GCCGCCCGAC GACACCGCGC CGCCCGCCCG CACCGTGGCC
AACGTCTGGT AA
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| Protein sequence | MNRTTLRQAT GPVSFLLIVL VCWFVAGMVA DRMVQQELDA ALRAQRQMST SIVDNMAEVI
ASDLAMSRAI PATMAEMDVV QRALVQSQNY AVNSEATEPA LRAALLKDAK MTAVSNFLHD
AQGFSGLDQI WLVNANGICV ASSNAANNPL AAERSFVGTD MRVRGYLTNA LLGAFSEAYG
VGRTSGEPGI FIAAPAYSEG LLVGVVVAKV GIARLRHWVA HAGTFVTDEN GVIIMAHNST
LEGRALPNSR AMQMSPAERK LIYQRDTFPD IQISVDSQVR EQAPWVPTAV AGQLFGVSER
PVPSLYQARG GLNSGLSAHL IDPLAAWPEL LRNHKRDHLL VFLTLAGTVA LAWVITVSYV
RERRHHRATR DLAEQLQSAN TLLSAEARHD ALTGALSRRY FLDLLRREIE RAHLGNEPLC
MAIADLDHFK QINDRFGHAA GDRALEHFVD TCRAELRGAD AIGRLGGEEF GLLLPATDLA
GGREVVERLR LRLKAMPSPK LPASVGLSVS IGITELSADD LPERIMSRAD TALYAAKSGG
RDRTEALPPD DTAPPARTVA NVW
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