| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3362 |
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| Symbol | |
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| ID | 4002424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 1216798 |
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| End bp | 1218267 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637946277 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_557675 |
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| Protein GI | 91782469 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0212058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGG TTCGACTTCC AGCGCTGCTC GCGAGCGTGA TGGCATTGTC AGCGTGCTCG
CTCGCCCCGC AATACCAGGT TCCGCCCACA CCCGTCGCCG CGCAATACAA GACCGTTGGA
CCGTGGACCG CCGCGCAGCC CGCGGACCGG ATAGACCGCA ACGGCTGGTG GAAAATGTAT
GGCGACGCCC AGCTCGACAC ACTCGAAACC AGCCTGCTGG CAAACAACAC CGATCTGCGC
GCCGCTTACG CGCACTATGC GCAAGCGCAG GCGTTCGTGG CGCAGGTCGA GTCGGGTCTG
TACCCGTCCA TCAGCGCCAG CGCCGTGCCG CAGCGCGACC GCCAGTCCGA CAATCGCCCG
CTGCGCGCGG GAGGCCCCAA CGACTACAAC TCCGTCACGC TCGGCGGCGA GGTCAATTAC
GACCTCGATC TGTGGGGCCG CGTGCGCGAC TCCGTTGTTG CGGGCAAGGA TGAAGCGCAG
GCGACCAAGG CCGATCTGGC TTCCGTGCAA TTGAGCCTGC AAGTCACCCT GGCGGACAGT
TATATCCGCT TGCGAGGCCT CGATCAGCAA ACCGATCTGT TGAACGAGAC AGTGGCGGCC
TACGCGAAGG CGCTGCAACT CACGCAGACC CTGCACAACG GCGGGATCGT GTCGGGCCTC
GACGTCTCGC GCGCGCAGAC CCAGTTGTCG TCGGCGAAGT CGCAGTTGTC GCAGAACCTG
GCGCAACGCG CGCTCATTGA ACATGCGATC GCCGTACTGG TCGGCGCCTC CGCGTCCGAA
TTCAGCCTGC CGCAGCAGAC CACCGCGATT GCGTTGCTGG CCATTCCGAC CGGCCTGCCT
TCCACACTGC TGCAGCGCCG GCCCGACGTC GCCGCAGCGG AGCGGCGCGT CGCGGAGGCC
AACGCGAAGA TCGGCGTGGC GCGGGCGGCC TACTTCCCGG ACATCACGTT GAGCCTGCAA
GGCGGCGTGC AAAGCGCGGC GTATGCCGGG CTCGTGAGCG CACCCAACCT GTTCTGGGCC
ATCGGTCCGC AACTCGTGCA ATACGTGTTC GACGGAGGCT ACCGCCGCGC TCAACTCGAC
GCCGCCAAAG CGGCCACCGA GGAAGCCGGA GAACGTTACC GTGGCGTGGT GCTGTCCGCT
TTCCAGCAGG TCGAAGACAA TCTGGCCTTG CTGTCCTACC TCGGCACTGC ACTCGGAGAA
CAACGCGACG CCGCGAGCGC CGCGCAGTAC TCGGTGGATC TGGCACTCCG TCAATACCGC
CAGGGCACCG TGGGTTACCT CGATGTCGTG CAGGCGCAAA CCGTTCAGCT CGACGCGCAG
CGCAGCCTGC TCGACATCCA GACCCGCCAG CTCAGCGCGA ACGTGCAGTT GCTGCATGCG
CTCGGCGGCG GATGGTCGAG CGATGAACTG GCGAGGGTGG CTGCCACGCC GGCACTCGTC
GCGAGTTCGA CGCAGCATGC CGCCAACTAG
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| Protein sequence | MAKVRLPALL ASVMALSACS LAPQYQVPPT PVAAQYKTVG PWTAAQPADR IDRNGWWKMY
GDAQLDTLET SLLANNTDLR AAYAHYAQAQ AFVAQVESGL YPSISASAVP QRDRQSDNRP
LRAGGPNDYN SVTLGGEVNY DLDLWGRVRD SVVAGKDEAQ ATKADLASVQ LSLQVTLADS
YIRLRGLDQQ TDLLNETVAA YAKALQLTQT LHNGGIVSGL DVSRAQTQLS SAKSQLSQNL
AQRALIEHAI AVLVGASASE FSLPQQTTAI ALLAIPTGLP STLLQRRPDV AAAERRVAEA
NAKIGVARAA YFPDITLSLQ GGVQSAAYAG LVSAPNLFWA IGPQLVQYVF DGGYRRAQLD
AAKAATEEAG ERYRGVVLSA FQQVEDNLAL LSYLGTALGE QRDAASAAQY SVDLALRQYR
QGTVGYLDVV QAQTVQLDAQ RSLLDIQTRQ LSANVQLLHA LGGGWSSDEL ARVAATPALV
ASSTQHAAN
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