Gene Bxe_A3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3288 
Symbol 
ID4002094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp1308277 
End bp1309404 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content67% 
IMG OID637946350 
Productputative lipopolysaccharide core biosynthesis glycosyltransferase protein 
Protein accessionYP_557747 
Protein GI91782541 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGGC TTGCCGGGCG TCTTCGTATT TTTGCGCGGG CCATTCCGCG ACTGCTGATC 
AAGCCATTGC GCCGCGAGCC GCGGCACCCG CGCCGTATCC TGATTGCGCA CCACCTGTTG
CTTGGCGACA CGCTGCTGCT CACGCCGCTG CTCGCCAAGC TGCGCGCACA ATATCCGCAA
GCTCAGATCG TTCTCGCCTG TCCGAAGGCG ATTGTGCCGC TGTATGCCGG CCGGCCTTTC
GGTGTCGCGG CGTTGCCGTT CGATCCGCGT GATCCGCAGT CGGTGCGGGA CGTTCTGCTT
TCCGGACCTT ACGACCTCGG CATGGTGCTC GGCGACAATC GTCACAGCTG GCTCGCGCTG
GGCGCGGGCT GCCGCTGGAT CGTCGGACAC GCGGGCGACG AGCCGGCCTG GAAGAACTGG
CCGCTCAACC GGAGCGTGCC GTATCCCGCT GCGCCGGCGG CCTGGGCCGA CCTCGCCGCG
GAACTGATCG AGGGACCGCC GCCGCGTGCT TACCGGCCTG CCGATTGGTC CGCGCCGCAG
CATGCGGCTT TGCCCGAGGC ATCGCAGCTC GCGAAACCTT ATGTGGTGCT TCATCCGGGC
GCGAGCACGC GTGTCAAGCG CTGGCCCAAC GCGCGCTGGC GCGAACTCGC GCAACGCGTG
GAAGCGCTCG GCTATCTGCC GGTCTGGACT GGCGGTCCGG GTGAAGCCGA ACTGATTCGC
GAGATCGACC CTGACCTTCG TCATCCGAAC CTGGCGGCGC GGCTCGGCCT CGGCGAGCTG
TGGCATCTGT TTGCCGGCGC GCAAGCCGTG GTTTGTCCCG ATACCGGCGT CGCGCATCTG
GGGCGTCTGA TCGGGGTGCC CACCGTCGTG CTGTTCGGCC CCGGCAATGC CTCGATCCAC
GGGGCGGGGC GCTACTGGCG CGAGGTGCCG TTCGTGCCCA TTACGATCGC GGAGATGCCG
TGCCGCGATC AGCCGTTTAT TTTCCGCCGC AAGGTAGCAT GGGTGCGGCG CTGTGATCGC
AACGAGACGA CCTGCGTCGC ATGGCGCGGC GACCATGCCG ACTGCATGGG CCGGCTGTCC
GTGGAGTCGG TGTACAACGC ATTGCAAAAT GTTCTGGTGA AAGTGTAA
 
Protein sequence
MSRLAGRLRI FARAIPRLLI KPLRREPRHP RRILIAHHLL LGDTLLLTPL LAKLRAQYPQ 
AQIVLACPKA IVPLYAGRPF GVAALPFDPR DPQSVRDVLL SGPYDLGMVL GDNRHSWLAL
GAGCRWIVGH AGDEPAWKNW PLNRSVPYPA APAAWADLAA ELIEGPPPRA YRPADWSAPQ
HAALPEASQL AKPYVVLHPG ASTRVKRWPN ARWRELAQRV EALGYLPVWT GGPGEAELIR
EIDPDLRHPN LAARLGLGEL WHLFAGAQAV VCPDTGVAHL GRLIGVPTVV LFGPGNASIH
GAGRYWREVP FVPITIAEMP CRDQPFIFRR KVAWVRRCDR NETTCVAWRG DHADCMGRLS
VESVYNALQN VLVKV