| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2541 |
|---|
| Symbol | |
|---|
| ID | 4003448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 2118672 |
|---|
| End bp | 2119910 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637947094 |
|---|
| Product | putative CP4-like integrase |
|---|
| Protein accession | YP_558483 |
|---|
| Protein GI | 91783277 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.016489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGAC GCGTCGAACC GAAGTCAGAA TTAGTGTTCC GTGCCGCCAA AGCGCGCGCC
CGTTCCTACC TTCTCGCGGA TGGAAACGGA CTCGCCCTGA GGGTCCAGCC GAACGGCACC
AAAACCTGGC TGTTCCGCTA TCGACGACCG AGCACAGGCA AGGAGAACTT CCACAGCCTC
GGCCCCTACC CCGATATCAC GCTCACTGAT GCGCGACGAT CGGCCACTAC CGCACGCAAT
CTCGTACGCG AAGGCATCGA TCCGGTTGCA TATCGCCAGG CCGAGTCCAT CGCCCGCAAA
CGCGTGGCCG ACGGCGCCTT CCATCTCGTG GCCCAGCGCT GGCTCGACTT CAAACGCAAG
GAATGGGCGG ACGAAACCTA CCGGAAGGCG GAGTTTGTCG TGCGTGAATA CCTGACTCCC
GCACTCCGCA ACAAGCCCAT TTCGACCCTT GCCACGCCAG AGGTCAAGCC CGTACTCGAA
GCGATTGCAG CACATGCGCC TAACCTCGCG ACCAAGGCAC GGCAGTATGT CGGTGGCATC
GTGACGTACG CCGTCCAGAA CGGGTTGCGC GAAGATGGCG CCGCCTTGAC CCTCCGCGGC
GTTGTGCCCC GCCACAAGAA AGGCCATATA CCAGCGATCA CCAGGCCTGC GGACATCGCT
CCGCTCGTTC TTGCTATCGA TGCCTACAAG TCACCTATTA CACGCGCCGC CCTCAAGCTC
ACCATGCTGA CCGGCCTTCG CCCAGGCGTG GTTGCCGCAG TGCCGTGGGA CGAGGTGAAC
CTCAAGACAG CTGAATGGCA TGTTGCAGCC GAGCGGATGA AAATGCGGCA CGATCACATC
GTGCCATTGC CAAAGCAGGC GATCGCCGTC CTGAACGAGT TGCAGTCGCT TACCGGCAAG
GGGCATTTCG TCTTTCCGTC CCCTGCCCGT CAAAAGACTC TTCATTTACA TCGAGACGCA
TTGAGCAAAG CACTGCGGGA GATGGGATTT CAAGGAAAGC ACGCGACGCA TGGTTTTCGG
GGCATGCTTC GTACGGTCGG ACGAGAGCGA CTTGGTATGG ATATCGATGT ACTGGAAGCG
CAACTGGCAC ACGCCAAGCG TGGCGATGTA CAAAAGGCCT ACGATAGAAC AACGTTTGAC
GACGATCGTC GCAGGGTCAT GCAGGAGTGG GCCGACTATA TTGATCGGCT AAGCATGCCA
ACGACGGCCG CAGGAGAGGG TGTAATTAGT TTTGTGTAA
|
|---|
| Protein sequence | MPRRVEPKSE LVFRAAKARA RSYLLADGNG LALRVQPNGT KTWLFRYRRP STGKENFHSL
GPYPDITLTD ARRSATTARN LVREGIDPVA YRQAESIARK RVADGAFHLV AQRWLDFKRK
EWADETYRKA EFVVREYLTP ALRNKPISTL ATPEVKPVLE AIAAHAPNLA TKARQYVGGI
VTYAVQNGLR EDGAALTLRG VVPRHKKGHI PAITRPADIA PLVLAIDAYK SPITRAALKL
TMLTGLRPGV VAAVPWDEVN LKTAEWHVAA ERMKMRHDHI VPLPKQAIAV LNELQSLTGK
GHFVFPSPAR QKTLHLHRDA LSKALREMGF QGKHATHGFR GMLRTVGRER LGMDIDVLEA
QLAHAKRGDV QKAYDRTTFD DDRRRVMQEW ADYIDRLSMP TTAAGEGVIS FV
|
|---|
| |