Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A2321 |
Symbol | |
ID | 4004961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 2342871 |
End bp | 2345390 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637947317 |
Product | putative transmembrane protein, AsmA-like |
Protein accession | YP_558701 |
Protein GI | 91783495 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.704699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGTGT CGAGCACAAC TGGAAGGCGC ATCGGGAAAA TCATCGCATG GCTGGTGGCG ATCATCGTCA TTCTGATCGT GGCGTTGACC ATTTTCATCC TGACCTTCGA CTGGAACCGT GCAAGGCCTT ATATCAACGA CAAGGTCACG CAGGCAATCG GCCGGCCGTT CGCGATCAAC GGCGATCTGA AAGTGGGCTG GCGGCATCCC GTGGGCGAGA CCGGCTGGCG CGGCTGGGTG CCCTGGCCGC GTTTCTCGGC GGCCAACATC ACCGTGGGCA ATCCGGACTG GACCAAACAG CCGCAATTCG CCACGCTCGA CGAGATCGAC TTCCAGGTCA AGGTGCTGCC GCTGCTCACG CACGATATCG TGATTCCGGC CATCAACCTC GTGAATCCCT CGGTCGACCT GGAGCGCCTG CTCGACGGCC GCAACAACTG GACCTTCAAG CTGGCGTCGT CCGGCGGGCC TTCCGAATGG AAGCTCGATC TGCACGATAT CGCGTTTGCC AAGGGCAACA TCGCGCTGTC CGATCAGCAG AAGAAGGTCG ATTTGCAGAT GGTGGTCGAT ACGCTCGGCC AGCCGATTCC GATTGGTGAA GCGATGAAGC AGCAGGAAGT GGCGTCGCGC AGCGCGTCGG CCGAAGCGAT CGGCAAGGCG GGCGCGACCA GGCTGACCGC GCAGGCGAAT GCGCAGGCGG CATCGGAGGC TGCGGCGGCA TCCGCGGCGG CGGCCTCCGG CGCATCGGCC GCGGATATCA CCGCGTCGGG CACGACGGCG GCCACGGGCG CGTCAGGTGC GCTGGTCGCG GGCGGTTCGA AGGGCACCAG CGCGGCAGTC AGCGCAGGCG CGAGCGGTGC AGTGGTGGCG TCGGCTCCGG CATCGGCGCC CGCATCGGCT TCGGCGGCGA GCGGCGCGGA AGCTCAGGCG GCAGCGAAAC GCGAGATTCC GCCATACGCC ATCGGCTGGA CCGTCAAAGG GACGTACAAC AAGACGCCAG TGTCGGGCAG CGGCAAGGTC GGCGGCGTGC TGGCGTTGCA GGACGCCAAC CGGCCGTTCC CGGTGCAGGC CGATGTCAAG GCAGGCGATC TGCATGTCGG CCTGGTCGGT ACGATTACCG ACCCCGCGCA CCTCGCAGCG GTCGATCTGC GCCTCTGGCT GCAAGGCAAC AGCATGGCGC GTCTCTATTC GCTCACCGGC GTAACCCTGC CCGACACGCC GCCCTATGCG ACCGAAGGCC GCTTCGTCGG CCAGTTCAGG TCCAGCGGCA ACGTCTTCAA GTATGAAAAT TTTACAGGCC GGGTCGGCGG CAGCGATCTC AACGGCTCGT TGACTTATAC CGCGCGTGAA CCGCGTCCGC TGCTGCAGGG CGACCTGATC TCGCATGTGC TGCAGTTCTC GGATCTGGCG CCGGTGATCG GCGCGGATTC GAACGCCAGC AAGGCGAAGC GTGGCGACGC AACCGCGCAG CCGTCCAACA AGGTGCTGCC GGTGGAGGAA TTCCGCACCG ACCGCTGGAA GGCGATCGAC GCCGACGTGA AATTCACCGG CCGGCGCATC ATCAAGAACG TGAACCTGCC GATTACGGAT CTGTACACGC ATATCGTGAT GACCGACGGC GTGCTTTCGC TGGAGCCGTT GAAGTTCGGC GTGGCCGGCG GCACGCTGGC TTCGGACATT CATCTGGATG GCAGCGGAAC GCCGCTCAAG GGGCGCTTCG CGACGTCGGC GCGGCATCTG AAGCTCAAGC AGCTGTTCCC GAACTTCAAG ACCATGCAGA ACGCGCTCGG TGAAATCAAC GGCGACGCCG CGCTGACCGC GACGGGCAAT TCGCCGGCGG CGCTGGCCGC CACCTCGAAC GGCGAGGTGA AGGCGCTGGT GACCGACGGC ACGGTAAGCC GCCTGCTGAT GGAAGCGGCC GGCCTGAACG TGGCGAATGT CGTGTATGAA AAGCTGTTCG GCAATCGCGA CGTGAAGATC AACTGCGCGG CCGCCGATTT CGTCGCGACC AACGGTGTGC TCGATTCGCG TGTCTTCGCG CTCGACACGG ACGACGCAGT GATCGATATC GAGGGCAATG TGAATATGCG CGACGAGACG ATGGACCTGG GCGTGCATCC GCATACCAAG GGTTTCCGGG TATTCTCGCT GCGCTCGCCG CTCTATGTGA AAGGCACGTT CAAGGATCCG CACGTGGGCG TGAACGCGGC CGCGCTGGCG TTGCGCGGTG GTGCGGCGGT CGGCCTCGGG CTGATCAATC CGTTTGCGGC ACTGATTCCG TTGCTCGCGC CGAGCAACAA CAAGCCGCTG CCATGCAACC AGTTGCTCGC GCAGGTCCGG CAGGCGCCGA CGGCGCCGCC GCCGGGCTTG AAGCAGCAGC CCAAGTCCTC CATTTCGCTG GATGGCGTGC CGGTCAACAA GTCTTCGGGC GGCGCGTCCG CGCCCGCTGC GCCCGCTACG GCGGACAAAA AGCCAGCGGT GATGTCGCCG GCCAGCGCGG CTCAATACAA GGGGAGCTGA
|
Protein sequence | MAVSSTTGRR IGKIIAWLVA IIVILIVALT IFILTFDWNR ARPYINDKVT QAIGRPFAIN GDLKVGWRHP VGETGWRGWV PWPRFSAANI TVGNPDWTKQ PQFATLDEID FQVKVLPLLT HDIVIPAINL VNPSVDLERL LDGRNNWTFK LASSGGPSEW KLDLHDIAFA KGNIALSDQQ KKVDLQMVVD TLGQPIPIGE AMKQQEVASR SASAEAIGKA GATRLTAQAN AQAASEAAAA SAAAASGASA ADITASGTTA ATGASGALVA GGSKGTSAAV SAGASGAVVA SAPASAPASA SAASGAEAQA AAKREIPPYA IGWTVKGTYN KTPVSGSGKV GGVLALQDAN RPFPVQADVK AGDLHVGLVG TITDPAHLAA VDLRLWLQGN SMARLYSLTG VTLPDTPPYA TEGRFVGQFR SSGNVFKYEN FTGRVGGSDL NGSLTYTARE PRPLLQGDLI SHVLQFSDLA PVIGADSNAS KAKRGDATAQ PSNKVLPVEE FRTDRWKAID ADVKFTGRRI IKNVNLPITD LYTHIVMTDG VLSLEPLKFG VAGGTLASDI HLDGSGTPLK GRFATSARHL KLKQLFPNFK TMQNALGEIN GDAALTATGN SPAALAATSN GEVKALVTDG TVSRLLMEAA GLNVANVVYE KLFGNRDVKI NCAAADFVAT NGVLDSRVFA LDTDDAVIDI EGNVNMRDET MDLGVHPHTK GFRVFSLRSP LYVKGTFKDP HVGVNAAALA LRGGAAVGLG LINPFAALIP LLAPSNNKPL PCNQLLAQVR QAPTAPPPGL KQQPKSSISL DGVPVNKSSG GASAPAAPAT ADKKPAVMSP ASAAQYKGS
|
| |