| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A2131 |
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| Symbol | |
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| ID | 4004460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 2565650 |
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| End bp | 2568142 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637947508 |
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| Product | spermine/spermidine synthase family transmembrane protein |
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| Protein accession | YP_558889 |
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| Protein GI | 91783683 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.355306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0157921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTGC TGTTTGCATC GGGCGCGGCG TCACTGATTT ACCAGGTGCT GTGGATCAAA
CAATTAGCGC TCGTCGTGGG TGTGGACGTA CAGGCGGTCA CGACGGGCGT CAGCGCCTTT
TTCGCAGGTC TCGCGCTGGG TGGCTGGCTG CTCGGCAGGC TGGCCGATCG CCTCTCGCGG
CCGTTGCTGC TTTACGCCGC ACTGGAAAGC GGCGCGATGG TGCTGGCCGT GGCCGGCACC
ATCGCGCTGG CGCACGCGGC CGCGCCGTTC GCATGGCTGC AGGATCGCAC GGGGCCGCTT
GCGTGGGTGT TGCCGTTCGC ACTGGTCGGC CTGCCCGCCG TGCTGATGGG CGGCACGCTG
CCGGTGCTGA TGCGCGCGTT GGGCCCGCGT GCGACACGCC TGGGCCGCGC CGGCGCACGC
TTGTATGCGG CCAATACGGG TGGCGCGATC GCCGGTACGC TCGCTGCCGC CTTCATACTG
ATTCCGTTAC TCGGCGTACA AGGCAGCGCG TTTGCCGCGG CCGGGTTGAA CGCGCTCGCC
GCGCTGAGCG CGCTGCTCAT TAGCCATTTC ACTTCCGATC GCGATCCCGC CGTTATACCG
CCACTCGAAA CGCCGCCACT CGAAACACCC TCTCCAGCCG GAACAACTTC CGACCATGCC
ACGCCCGGCG CTCGCCTCGT CGTCGCTCTC TATGCGCTAG CCGGTGGCAT CGCGCTGGGT
TACGAGGTGG TGTGGTCGCA ACTGATCGTC CAGTTCATCA GCACCCGCAG CTTCGCGTTC
GCGATCGTGC TCGCCACGTA TCTGCTCGGG CTCACACTCG GCAGCGCGCT CAGCTCGCGC
CGTGTCGATC GCGCGCGCGA TCCGTGGGGT GTGTTCGCGC TGCTGATCGT AGCGGCCGGA
CTTGTCGCGT TGCTGCAAGT CGCCGCGTTG GGTGGCTGGC TGCTTCAATG GCAAAGCCTT
GCGCGCGAGG CGACGTTCTC CGCCACTGGC AGCCTGCTCG CCGCGATGTG CGCGGGCTTT
GCGGTCGCGG CCGCGTGCAT CGTATTCGTG CCCACGCTAT TGCTGGGTGC GGCGTTCCCA
TTCGCGCTGC GCGTGAGCGT GGATGCGCGG CATACAGGCC GCGATGTCGG CGCCGTAGTG
GCGCTCAATA CCGCGGGCGG TATCGCCGGC ACGCTGCTCG CCGGCTTCCT GCTGGTTCCA
GCCCTCGGGC TGGTGCATGC GCTAGCCGTG CTCGCCGTCC TGGCCGGCGC GGTGGGCGTT
GTCGCCGTGT GGCGAGGTCA TGGCGTGCGG CGCGGCACTC GCTGGAGCGT CCCGGTGCTT
GCTATGGCAA CCCTGTGCGC CGTGCTGCTG ACACCGTCGG ACCGTTTCGC CACCCTGCTC
GCCGCGGCAC GCGGCGGCAC GCTGCTCTCC TACGAGGAAA GCGCGGGCGG CACCGTGGCC
GTCGTTACCC AAGGCGCGGG CGACAAACAG TTCCGGCGTC TCTACATTCA GGGAGTCTCC
AACTCCGGCG ACGCGATGAC CTCGCTGCGC TATATGCGTC TGCAGGCATT GCTGCCACTG
CTGGTTCACC GCGACACGCC GCGCAGCGCG CTTGTAATCG GACTCGGTAC GGGCATCACG
GGCGGTGCGC TGCTCACGTG GCCCGGCCTC GACAAGCGCG TGGTCGCCGA GTTGTTGCCG
GCGGTCGTGC ACGCCGCGCC GCAGTTCAAA GGCAACTACG GCATCAACGC CGACCCGCGT
GTCGATATCC GCCTGCGCGA CGGGCGGCGC GAACTGCTGC GCAGCAGCGA ACGATATGAC
CTGATCACAC TCGAGCCGCC GCCCCCCTCG GCAGCCGGCG TGGTCAATCT CTACTCGTCG
GACTTCTACC GATTGGCGGC CTCGCGTCTG AGCACGAATG GCGTTGTTGC GCAATGGCTG
CCGCTACCCA CCCAGAACGA AGACGACACG CGTTCGCTGA TCCAGAGCTT CATCCAGGTG
TTTCCGTATG CCGCGCTATG GACCACCGAG TTGCACGAGA TGATGCTGAT CGGTTCAATG
CAGCCAATCG AACTGGATGT GCCGCGTATC GAGTCGCGCT TTGCGCAACC GCAGGTGGCG
GCGGCACTGC GCGAGGTGGG CGTGGCCTCG CCGGCAGCAC TGCTGGCGAC CTGGATCACC
GATCGCGCAG GACTCGCTTA TTACACCGCA GATGCCCCGC CGGTAACCGA CGACAGGCCA
CGCATCGAAT ACGCGGCGTG GGTGCGCCGC GACGGTTTCC CGGACACGCT CACGCACCTG
CTAGCGCTTC GCGGCGAGCC GCCATTGCTG CACGCCGACA GGGCATTCCG CGCGGCCCTG
GACGCCGAGC GCGGCGCGCT GCAAAGTTTC TATGCAGCGG GCCTGGACGC GTACCGCGGC
GAGCGTGATA CGTGGTCTCG CGACATTGGC GATGCATTGC AGGCACAGCC GGATAATCCC
TACTTCCGCT GGTTCGTCGG CAACGAACCG TAG
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| Protein sequence | MLLLFASGAA SLIYQVLWIK QLALVVGVDV QAVTTGVSAF FAGLALGGWL LGRLADRLSR
PLLLYAALES GAMVLAVAGT IALAHAAAPF AWLQDRTGPL AWVLPFALVG LPAVLMGGTL
PVLMRALGPR ATRLGRAGAR LYAANTGGAI AGTLAAAFIL IPLLGVQGSA FAAAGLNALA
ALSALLISHF TSDRDPAVIP PLETPPLETP SPAGTTSDHA TPGARLVVAL YALAGGIALG
YEVVWSQLIV QFISTRSFAF AIVLATYLLG LTLGSALSSR RVDRARDPWG VFALLIVAAG
LVALLQVAAL GGWLLQWQSL AREATFSATG SLLAAMCAGF AVAAACIVFV PTLLLGAAFP
FALRVSVDAR HTGRDVGAVV ALNTAGGIAG TLLAGFLLVP ALGLVHALAV LAVLAGAVGV
VAVWRGHGVR RGTRWSVPVL AMATLCAVLL TPSDRFATLL AAARGGTLLS YEESAGGTVA
VVTQGAGDKQ FRRLYIQGVS NSGDAMTSLR YMRLQALLPL LVHRDTPRSA LVIGLGTGIT
GGALLTWPGL DKRVVAELLP AVVHAAPQFK GNYGINADPR VDIRLRDGRR ELLRSSERYD
LITLEPPPPS AAGVVNLYSS DFYRLAASRL STNGVVAQWL PLPTQNEDDT RSLIQSFIQV
FPYAALWTTE LHEMMLIGSM QPIELDVPRI ESRFAQPQVA AALREVGVAS PAALLATWIT
DRAGLAYYTA DAPPVTDDRP RIEYAAWVRR DGFPDTLTHL LALRGEPPLL HADRAFRAAL
DAERGALQSF YAAGLDAYRG ERDTWSRDIG DALQAQPDNP YFRWFVGNEP
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