| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1277 |
|---|
| Symbol | |
|---|
| ID | 4004921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3507259 |
|---|
| End bp | 3508623 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637948359 |
|---|
| Product | putative phage integrase |
|---|
| Protein accession | YP_559728 |
|---|
| Protein GI | 91784522 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.207014 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCA AGCTCACTGT AAAAGAACTG GAAGCTCTAA AACCCGCCGA TATCGGCACG
ACGATCCGGG ACGAGGGTGG TATATGGGGA AGGGTCCGCA AGGCCGGTGA CGGCGTTTCT
GTGACCTTTT GGTATCGGTA TAAGTGGCAG GCCAAGACCC GCGATACCGC GATTGGCACA
TGGCCCGCCG CGAGCCTGCC GAAGATCAGG AAGAACCGGG ACGCCGCGCG CGCACTCGTC
AAGGATGGAC GCGACCCCAA CGAGCAGCGT GAAATTGACC GGCGCGACCG GGAAGCCGCC
GAAGCGCTGC GCAAGGCCGA GGCGTTGACC GTGAGCGATC TGTACGATGC ATGGTTCCCC
ACGATCAGCG TGAAGCGTGG CAAACGTGGC CGGAAAGACG AGGGCAAGGA AATCGAACGC
ACGTTCAATT TGTTCGTGCT GAAGAAGATC GGCACCAAGC TGTTGACGAC CATCTACAAG
TCGGACGTGC AACCGATCCT GACCCGGATA TCTGACGGAG GAGCGAACCG GCAGGCTACA
GCGTTGCTCA CCGACCTGAA GCAGATGTTT CGCTGGGGCG ACCAGAATCA ACCATACAAG
CGGCTACTCG CCGCCAGTGA CGTACTGGCG ATCAAGCCGG AGGACATTGT GAGCGGCGAC
TACGATCCGG TTGCCGACAA CGAGCGAACC CGCGTGCTGA CCGAGGCGGA GATCAGGCAG
CTTGCCAAGC TCGTTCCTGC CGCCGACCTG CCGCTCACAA CGCGCGCCGC AATCTGGATC
ATGTTGTCGT GCGGCACCCG TATCGGTGAG ACCGTCGCCA CGAAGTGGGC GCATGTCGAT
CTGCAAACCG GTCGCTGGTC GATCCCGAAG GAACACACCA AGTCAGGTGT GGCGCTGGAA
GTTGCGTTGT CTGACTTCGC ACTCGCGCAA TTCCAGACAC TTGCGGATGC ACGTGACGCC
CTGCCGGTTG AGGATCGCAG CGACTACGTG TTTCCGAGCC GTAACGACCG AACCAAGCCG
CTCAACAATC AGGCAGTGGG CAAGCAGCTT GCCGATCGCC AGCGGACCAG TGGGGAACCG
ATCAAGGGCA GGACGGAGAA GGTGGACGCG CTCGCGCTCG ACGGCGGGCA ATGGCGTTGC
CATGACCTTC GCCGCACGGC GGGGACGCTT ATGCAGTCGC TTGGCGTACC GGAGTCCATC
GTCCACCGTT GCCTGAATCA CGCACGCAGT GACAAGCTCG ATCGCGTGTA CCTGCAACAC
GACTACTCGA AGGAGATGGC CGAGGCGTGG GCGGCACTCG GTGTGCGCTT ACAGGCATTG
AAGACCGACA ATGTGCTGAC CCTGCCGAAT GCATCCGTCG CCTGA
|
|---|
| Protein sequence | MASKLTVKEL EALKPADIGT TIRDEGGIWG RVRKAGDGVS VTFWYRYKWQ AKTRDTAIGT
WPAASLPKIR KNRDAARALV KDGRDPNEQR EIDRRDREAA EALRKAEALT VSDLYDAWFP
TISVKRGKRG RKDEGKEIER TFNLFVLKKI GTKLLTTIYK SDVQPILTRI SDGGANRQAT
ALLTDLKQMF RWGDQNQPYK RLLAASDVLA IKPEDIVSGD YDPVADNERT RVLTEAEIRQ
LAKLVPAADL PLTTRAAIWI MLSCGTRIGE TVATKWAHVD LQTGRWSIPK EHTKSGVALE
VALSDFALAQ FQTLADARDA LPVEDRSDYV FPSRNDRTKP LNNQAVGKQL ADRQRTSGEP
IKGRTEKVDA LALDGGQWRC HDLRRTAGTL MQSLGVPESI VHRCLNHARS DKLDRVYLQH
DYSKEMAEAW AALGVRLQAL KTDNVLTLPN ASVA
|
|---|
| |