| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0832 |
|---|
| Symbol | |
|---|
| ID | 4003211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3960182 |
|---|
| End bp | 3960967 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637948798 |
|---|
| Product | ribosomal small subunit pseudouridine synthase A |
|---|
| Protein accession | YP_560154 |
|---|
| Protein GI | 91784948 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.190821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAT CGCAGTGGTC CGACTCGCGC GCGCGGGGCG CGCTCCGCTT CCTGCGGTGT
TATTCTTCGC TCGCCATGAA TCTCGAAAGC ATTCTCTTCA CTCAAGGTTT CGGCTCGCGC
CGTCAATGCC GCGCGCTGAT CGCCGACGCG CGCGTGAGCA TCGGCGGCGC TGTCTGCACC
GATGCCGACG CCGATTTCCC CACCGGCGAC ACCACGTTCT CCTTCACCGT GGACGGTGTC
GACTGGCCGT ATCGCGAACA CGCCTATCTG CTTCTGAACA AGCCGGCGGG CTACGAATGT
TCGCGCGATC CGCAGCATCA TCTGAGCGTG TTCAGCCTGT TGCCGCCGCA GTTCGCCGGG
CGCGGCGTGC AATGCGTGGG CCGGCTGGAT CAGGACACGA CCGGCCTGCT GCTGCTCTCT
GACGACGGCA AGTTCGTTCA CCTGTTCACC TCGCCAAAAC GCAAGGTGCC CAAGGTGTAT
GTCGCCACCA CGCGCCATCC GATCGACGAC GCGCAATTGA GCGCACTGCG CGACGGCGTG
TTGCTGAATG GCGAGGCCAG ACCGATTGCC GCAGTCGACG TGGAGGCGCG CGGCGACCAC
ACGCTCGCGC TCACCGTGAT GGAAGGCAAG TATCACCAGG TCAAGCGGAT GATCGCGGCA
GCCGGCAATC GCTGCGAAGC GCTGCATCGC GAGCGGATAG GCGGGCTCGC TTTACCCGAA
GCACTTGCGC GAGGCGCGTG GCAATGGCTC GACGAAACCG ACCTCGGATC TCTACGGAGC
GGGTAA
|
|---|
| Protein sequence | MNGSQWSDSR ARGALRFLRC YSSLAMNLES ILFTQGFGSR RQCRALIADA RVSIGGAVCT
DADADFPTGD TTFSFTVDGV DWPYREHAYL LLNKPAGYEC SRDPQHHLSV FSLLPPQFAG
RGVQCVGRLD QDTTGLLLLS DDGKFVHLFT SPKRKVPKVY VATTRHPIDD AQLSALRDGV
LLNGEARPIA AVDVEARGDH TLALTVMEGK YHQVKRMIAA AGNRCEALHR ERIGGLALPE
ALARGAWQWL DETDLGSLRS G
|
|---|
| |