| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5516 |
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| Symbol | |
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| ID | 4016475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 266441 |
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| End bp | 268645 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637945135 |
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| Product | phage integrase |
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| Protein accession | YP_552267 |
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| Protein GI | 91791317 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0248661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAT GGACAACTCC ACTGGAAACC TTGCTGCTGG ACGGCCCGGT TACCCTTGGC
CACCCTGCCC CTGCCGCCAA AAAACGCGGC CGGCCCGTCG GCTGGCGCAT GCCCACGTTG
GCAAACCTGA AGCAGCTCAC GCTGGAGGAT TTTTCATTTG TGCGCGGAGT CATGAGCGGC
ATGAAGCCGG CCGTGGCCTT CAGGCAGTTT TACGCGAACC GCCACTTCGA CGCCGACGGC
AACCCGGTCA TTCCGCACGG CGCGGAGATC AACAGCCATG CTGAGAAGCT TCAGCAGGCG
ATCTTCGCGG CCGCGCGGTC CTCCGACAAG CCCGAGGCCC GGGCGGCCGC GCTGGCCCTG
GAGCGCCCCA CCCCCGAGCC CGCAGCCGCA CCGGCCGCGG TCGCCCAGGC CCACATGGAC
TACACGCAGT GGGCCGAGTC GCAGCCCGAG GACATGTATT CGGAAAACGA GATGGTCGAG
CTGTACAAGG ACTACCTCGC TGAGCAAGGC GTGGACGCCG GCACCGCCGC CCACCAGGGA
GTAGCGGACC AATCCCTGAG TGTCGGCGCC AAGGTCAAAG CCATCAATGC GTTGCAGACG
CAACTGGCCA ACCTGCCCCT GCCCGAGCAG GAGACGAATC TGTGGCTGGC CCCCTCGCTG
GTGAAGGCCT TCGCGCGCCG CAAGGTGACG ACCATGGCGG GCGTCGTGCA GGCGATCTCG
GTGGCCGGTC GGCACTGGCA CCGCACTATC AAAGGCCTGG GCCCGGGCCG CGCGGCGCGC
GTCGAGGGAT GGCTCGATGA CCATGCGGAC ACGCTGGGCC ATCTGCAGCG CCGCGGCCAG
CACTGGGAAG TCGCCCCGCC GCTGGCGAAG GCCATCCTGC CTCTGCAGCG CCCGCCCGCC
GCCGCCCTGC TCTCCTACAC CCCGGGCTCG GACACCGCAT CCGTGCACTC GGCCACTCTG
GTGCTGCGTT CCGGGATTGC ACCGCTGGAG CTGATGCTGA TCCCCCCTGC CCTGGATGGC
CAGGACGGCA TGTTCCGGAC GCAGACACCG AATCACCTGG GCGCGAGGAC CGACATCGAA
GCCGTCGGCG CCTGGCTCAA CAGCTACCTG GCTGCGGGCA AGCAGCGGAC CTATGACGCC
TACCGGCGCG AGGTCGAGCG CTTCTACATC TGGGCCGTGC TGGAAGCCAA GTGCGCCCTG
TCCTCAATCA CCTTGGGCCT TGCTCAGCAG TACCAGGCAT TCCTGCAGGC GGTTCCTGAC
CGCTACATCG GCACGGCGCG GGTCACGCGC CACGATCCGC GCTGGCGCCC ATGGCGCGGT
CAGATCGAAA CGTCCAGCCA GAACTACGCG CTCGGCGTGC TGTACCAGAT GTACCGCGTC
CTCCACGAAA ACGCCTATGT GACAGGGAAT CCGTTTGCGA GCATCCAGTA CGATGCCGGC
GGGATGAAGC GCCACGCCAT GGACGTGACG CGCAGCCTGC ACACCGATGA CCTCTATCTC
GTGCGTGAAG CGCTGGCCGC CCTCCCCGGC CTGAGGTCTG GCACCCTGCG TAAGGCCGCC
CTCGCCCGCC GAACCCGCCT GATCCTGCAC GTCGCCCTGA CCACCGGCAT GCGCCTGGCC
GAGATTGCAT CCGCCAACCT GAGCAGCCTG GGCCACCCCG TTGTTGACGG GCGCCCCGCC
GATGATTGGG TAATTACGGT ATTAGGAAAG GGCCAGAAGC TGCGTGATGT GCCTATTAGT
GAGAAGCTGC TCAGCATGAT TCTGGAGCAC CATGCGGACT GGCGTACCCT GATGAAAGGC
GACGAGGCGC GCATCGCTGC ATTCGACCTC TGCCCTCCCC TCGTCGCCGT GCTGGAGGCG
CCGGTGCGGG ATGGTGGCCG CGCCGTCACG GATCAGACCC AGCTGAAGAA CGATAACTCG
GCGCTGAGTG CGAACGCGTT GTACCGGACC TTGAAGACGT TTTTTAGGCA AATGGCCAGG
AAGGAGCGGG ACGAAAAACT CAAGGCCCGC ATCCTCAAGT TCAGCACGCA TTGGCTGCGC
CACACCTTTG CCCACGAGGT CTTGCGCGAG AACGACGGCG ACGAAGGACT CAAGCTTGCA
CAGCAGCTGC TCGGCCACGC ATCGATCAAC ACTACCGCCG AATACGTGCG ACAAGATCTC
TCCGCCAAAG TCAAGGCTGC GCGCAAGGTC AACCCGCTCG GCTAG
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| Protein sequence | MTEWTTPLET LLLDGPVTLG HPAPAAKKRG RPVGWRMPTL ANLKQLTLED FSFVRGVMSG
MKPAVAFRQF YANRHFDADG NPVIPHGAEI NSHAEKLQQA IFAAARSSDK PEARAAALAL
ERPTPEPAAA PAAVAQAHMD YTQWAESQPE DMYSENEMVE LYKDYLAEQG VDAGTAAHQG
VADQSLSVGA KVKAINALQT QLANLPLPEQ ETNLWLAPSL VKAFARRKVT TMAGVVQAIS
VAGRHWHRTI KGLGPGRAAR VEGWLDDHAD TLGHLQRRGQ HWEVAPPLAK AILPLQRPPA
AALLSYTPGS DTASVHSATL VLRSGIAPLE LMLIPPALDG QDGMFRTQTP NHLGARTDIE
AVGAWLNSYL AAGKQRTYDA YRREVERFYI WAVLEAKCAL SSITLGLAQQ YQAFLQAVPD
RYIGTARVTR HDPRWRPWRG QIETSSQNYA LGVLYQMYRV LHENAYVTGN PFASIQYDAG
GMKRHAMDVT RSLHTDDLYL VREALAALPG LRSGTLRKAA LARRTRLILH VALTTGMRLA
EIASANLSSL GHPVVDGRPA DDWVITVLGK GQKLRDVPIS EKLLSMILEH HADWRTLMKG
DEARIAAFDL CPPLVAVLEA PVRDGGRAVT DQTQLKNDNS ALSANALYRT LKTFFRQMAR
KERDEKLKAR ILKFSTHWLR HTFAHEVLRE NDGDEGLKLA QQLLGHASIN TTAEYVRQDL
SAKVKAARKV NPLG
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