Gene Bpro_5250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5250 
Symbol 
ID4016229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp449 
End bp1213 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content68% 
IMG OID637944877 
ProductIclR family transcriptional regulator 
Protein accessionYP_552009 
Protein GI91791059 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTGA CCCGCGTGCT GCGGCTGCTA CGGATACTGG CCGACCGCCG TGCCGGCCTG 
GCCCTGACCC CCTTGTGCTT GGCCTTGAAT GCACCGAAGA CCAGCGTGCT CTCGCTGTTG
CGCGGCCTCA CGGCGCATGG CTACCTGCAG CGCAGCAATG ACTTGTATGA ACTCGGCCCC
GAGGCGTTCT CGCTGGGGGC ATCGCTGGTG TCGGCCCGCT CGCTCGACAT CGTGGCCCTG
CCCTTCCTGC GCGAGGCGGT GGCACGATCC GGCGAGACCG CCCTGATCGC CAGAATCGAC
CGCACCGCAG GTCGGCTGGT CTACAACCCG ATCATCGAGA GCGAGCGCCC GATTCGTTAT
GCCGTGCCCG TCGGCACGAC GCGGCCGCTG TTTGCGTCTT CCTCTGGTCG CGTGCTGCTC
GCCTTCCAGG ACGAGGCCTG GCGGCGCGAC TACCTGCGCC GCGCCGACCT GCGGGCCATG
ACCGAACACT CGGTCACCAA CCGGGCGCAA CTGGCGCGCC TCATTGAAGA GGTCAGGGTC
AGCGGCGTGG CCGTTACCTT CGGTGAAGTC ACGCCCGACG TGGCCGGCTT TGCGGCCCCG
ATCTTCGAGC CCGACGGGCG CGTGAACGCG GCGCTGATCA TCGCCACCCC GATCGAGCGC
GGTCGCGCCA GCGCCGATGC GCTGCAACGC CTGGTGGTGA CGCTTGCACA AAATATCTCG
CACGCGCTCG GCCAACCTGC GCGGTCAGCA TCCAGCACTA CTTGA
 
Protein sequence
MAVTRVLRLL RILADRRAGL ALTPLCLALN APKTSVLSLL RGLTAHGYLQ RSNDLYELGP 
EAFSLGASLV SARSLDIVAL PFLREAVARS GETALIARID RTAGRLVYNP IIESERPIRY
AVPVGTTRPL FASSSGRVLL AFQDEAWRRD YLRRADLRAM TEHSVTNRAQ LARLIEEVRV
SGVAVTFGEV TPDVAGFAAP IFEPDGRVNA ALIIATPIER GRASADALQR LVVTLAQNIS
HALGQPARSA SSTT