| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5231 |
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| Symbol | |
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| ID | 4015958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 339646 |
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| End bp | 341064 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637944858 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_551990 |
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| Protein GI | 91791039 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00626423 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACAG TGACCTCTGA GGATACCGGC CGAAGAATTT TCGCGGATGC CGTTGGGGGC
TTGATGCGTG TCGCACGCAG GTTCCTTAGC AATGCCATTG CCACGGCGAA GGCTCAAAAG
GTGACGTTTG GCGCCATCAT CTTCGTGTTG ATGATGTCCA GTTTGATGGC CGTGGCGCAG
AACAATACTG CCGGTACTCC AGAAAGCGTT GTGTCAGGAC CGCCGGCAGT TAACAGCATA
GGGATGAATT CCACAGACGT GGCCTCCATG ATCGCGAAGT CCATGGACGA TAAGCTGAAC
GGACTCACAG GGTCAACAAC CCTCATGGGT GCGCGCGACA TCATTCTTGG TGTTGGATTG
GCAATCGGGC TGTTTTGGAC TGGTCTCAAG ACCATGGTTG CCGGCAAGGG TATTGGCGAG
CTGCTTGGCG AGTGGATTCC CATTCTGATC ACTGCTGGTG TGGTCACGGC TTTCACCACT
CCTGGCCCAG GCAGTGCAGG TAACCAAATT GCAGTCACCA TGGACCAGAT TGCAGGGGCA
ATCACCGGCG CAGCTGGGGG ACAAGCAATT GATACCTCTA GCGTTCAGGG CGTTATCGGT
TCTGCTGTGA CCACTACATT CAACGCTGTT GTGAGTGTTG CCAGAACTCC TCAGCGCACC
GAAGGTGGCT GGAGCAACAT TGCTGGCGCC ATTGCCTCCG TTCCCATCTG GGTGTTTGCC
ACGATCATGA AGCTTGTTAC CAGTTTCATC ATTGTTATAG CGATGTGCAT CTACATGGCA
ACGGCTGTGA TGGCTATGGT GAGCATCAAA TTGGTGATTG CTCTTGCACC AGTCATGGTG
CCATTCCTGA TCTTCAAGCC CACCGCCTGG CTCTTTGATT CGTGGCTAAG GTTTCTGCTG
GGTGCTTCCA TGATGAAGCT GGTGGGTGCG TTCATGCTAA GCCTTACTTC CGGGCTGATG
AGTTCGATGG TGCTGGTTGC ACAGAAGATA GATGCCGATT CAGCGGCCGG AACCTATGAC
ACCTTCACCG GCGACATCGT TTTGTTCGCC ACTATCCTGC TCCTGTCCGT CCTTGCAGGG
TTGCTGATGG CCCAGGTGCC CAGCATTTCG AGTGGCTTGC TGGCCGGAAG CGCCGGCGGG
GCAGGCTTCA GCGGCTTGAA AGGTGTTTCG CAGACTCTGG GCGCGAAAGC TGGCACCAGT
GCTACCAGCG CCGGTGGTCG CTATGGATAC GACAAGGGCA TTGGCGAGGC TCGTGCTGCC
CGTCAGGGTG CTAAGGATGC GGCCGGTGGT TTCTCGACTG GTGGCCGCCA ATATGGAAGC
CAACGCGCTT CTACAGCCTA TCTTCGTGGT CACGCGGTGG CTAAGGCAGG TGCTCCACAG
GCGGCCGCCG CCGCCAAAAA GGCCAATTGG CGGGATTGA
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| Protein sequence | MYTVTSEDTG RRIFADAVGG LMRVARRFLS NAIATAKAQK VTFGAIIFVL MMSSLMAVAQ
NNTAGTPESV VSGPPAVNSI GMNSTDVASM IAKSMDDKLN GLTGSTTLMG ARDIILGVGL
AIGLFWTGLK TMVAGKGIGE LLGEWIPILI TAGVVTAFTT PGPGSAGNQI AVTMDQIAGA
ITGAAGGQAI DTSSVQGVIG SAVTTTFNAV VSVARTPQRT EGGWSNIAGA IASVPIWVFA
TIMKLVTSFI IVIAMCIYMA TAVMAMVSIK LVIALAPVMV PFLIFKPTAW LFDSWLRFLL
GASMMKLVGA FMLSLTSGLM SSMVLVAQKI DADSAAGTYD TFTGDIVLFA TILLLSVLAG
LLMAQVPSIS SGLLAGSAGG AGFSGLKGVS QTLGAKAGTS ATSAGGRYGY DKGIGEARAA
RQGAKDAAGG FSTGGRQYGS QRASTAYLRG HAVAKAGAPQ AAAAAKKANW RD
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