| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5154 |
|---|
| Symbol | |
|---|
| ID | 4016037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007949 |
|---|
| Strand | - |
|---|
| Start bp | 263980 |
|---|
| End bp | 265302 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637944787 |
|---|
| Product | Rieske (2Fe-2S) region |
|---|
| Protein accession | YP_551919 |
|---|
| Protein GI | 91790968 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.291358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.277417 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCG CCGAACAAAA CGATTTCATT ACCCGGGTAG GCCCCGGTAC CCCGGCAGGC
AAGCTGCTGC GCCGCTACTG GCAGCCCGTG GCGCTGGCCG ATGACCTGAC CGGCCCACGC
CCGGTGAGGC CAGTACAACT GATGGGGCAG CATTTCGTGC TGTTTCGCGA CGAGAGCGGC
AAACTCGGCA TGCTCGACCG GGATTGCCCA CACCGCGGTG CCGACCTGGC ATTCGGCCGG
CTTGAAAACG GCGGCCTGCG CTGTTCTTTC CACGGCTGGC TGTTCGATGC CAAAGGCAGC
TGCCTCGAAA CCCCCGCTGA ACCCGCCAGC AGCAAGCTCT GCAGCCGCGT CAAGCAAGGC
GCCTACCCGG TGATCGAGCG CGCCGGCACC GTGTTTGCGT ATATCGGCGA GGGCGAGCCG
CCGGCGTTCC CCGAGTTCGA CTGCTTCGTG GCACCTGACT CGCACACCTT CGCATTCAAG
GGTCTGTTCG AATGCAACTG GCTGCAGGCG CTGGAGGTCG GCATCGACCC GGCCCATGCC
TCCTACCTGC ACCGCTTCTT CGAGGACGAG GACACGTCCG AGAGCTACGG CAAGCAGTTC
CGCGGCGCGT CGGCCGACTC CGACATGCCG ATCACCAAGG TGCTGCGCGA GTACGACCGG
CCCGAAATCA GCGTCGACCC GACCGACTAC GGTATGCGCT TGACCGCATT GCGCAAGCTC
TCCGAGACCA GCACCCACGT GCGCGTGACC AACCTTGTGT TTCCACAGGC GTTCGTGATC
CCGATGAGCG CCGAGATGAC GATCTCGCAG TGGCACGTGC CGGTCGACGA CACGCATTGC
TATTGGTATG CCATCTTCAC CAGCTTCACC GGCCCGGTGG ACAAGCAGCA GATGCGCGAC
CAGCGCCTGA AGCTCTACGA GCTGCCCGAC TACACCTCGC GCAAGAACAA GCGCAACAAC
TACGGCTACA GCATCGACGA GCAGCTGACC GAAACGTACA CCGGCATGGG CGACGACATC
AACGTGCACG ACCAGTGGGC CATCGAGTCG CAGGGACCAA TCCAGGATCG CACGCGTGAA
CACTTGGGCA GTACCGACAA GGGCATCGTC GCGTACCGTC GCATGCTGGT AAAGGCGATC
GATAGCACGC TGGCCGGCGA AAGCGCCCCC ATGATTATCG ACGCCGCGCA AGCTGGCGCG
CTCACCGGCC CGCCGTCGAT CGACGGCATA GCGAAAGCAG GCAGCGCAGA TGGCTACTGG
CAAAGCGCCG ATCGCGAGCG CCGCCTCAAA TCGGACTGGG CTTCCGCCCG TCTCACAGCT
TAA
|
|---|
| Protein sequence | MISAEQNDFI TRVGPGTPAG KLLRRYWQPV ALADDLTGPR PVRPVQLMGQ HFVLFRDESG
KLGMLDRDCP HRGADLAFGR LENGGLRCSF HGWLFDAKGS CLETPAEPAS SKLCSRVKQG
AYPVIERAGT VFAYIGEGEP PAFPEFDCFV APDSHTFAFK GLFECNWLQA LEVGIDPAHA
SYLHRFFEDE DTSESYGKQF RGASADSDMP ITKVLREYDR PEISVDPTDY GMRLTALRKL
SETSTHVRVT NLVFPQAFVI PMSAEMTISQ WHVPVDDTHC YWYAIFTSFT GPVDKQQMRD
QRLKLYELPD YTSRKNKRNN YGYSIDEQLT ETYTGMGDDI NVHDQWAIES QGPIQDRTRE
HLGSTDKGIV AYRRMLVKAI DSTLAGESAP MIIDAAQAGA LTGPPSIDGI AKAGSADGYW
QSADRERRLK SDWASARLTA
|
|---|
| |