Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5053 |
Symbol | |
ID | 4016131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007949 |
Strand | + |
Start bp | 164832 |
End bp | 166580 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637944691 |
Product | ParB family protein |
Protein accession | YP_551823 |
Protein GI | 91790872 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.165275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAAA CCCAAACCCC TATCAGGACA TTCCCCCAGA AGGGCTTCAA CTATCGCCGC CGATTCAACC AGGCAGCGAT GGATGAGCTT GTGGAGGACA TCCAGCGTCA AGGGATACTT CAGTCCATTC TTGTCCGCGG GAGCGATCCT GCGGAACAGA GTGAACTGCC GCGGCTGATC AAACTCAGCG ACATCAAAGC AGGCAAGTAC CAGGTCATTT CAGGCAATCG CAGGGTGCAT GCCGTTGAAA TCGCGTTGGG CGAAGAAGCG GAGGTCCCGG CCCTTGTTCG AATGATGACC GACGCTGAAG CAATGGCCGC CATGGTGAGC GAAAACAAGG TTCGCGAAGA TACGACCGCC ATTGAAGATG CTGAAGCAGC TATGCGCATG CTGGGGCTAC TCAACGGTGA TCGTGAAGAG GCGGCTAAAC GCCTTGGCTG GTCACCACAG GTTCTGAATT CCCGTCTGGG GATCATGAAT GCCACCGACA AGGTGCGTGA CGCCTACATC GATGAAAAGA TCCTTTTGGG TCACGTCGAA ATCCTGGCGG CCCTCATCAA GGACGTGCAG GATGGTGTGC TGGAGAAAAT GCTGGCACGC CCCAAGTTGC CCACGGTTGC TGAACTCAAG GCCATGGCTG AGCAGATTCT GCTCAACCTT GATGCCGCGA TCTTCGACAA GGCAGAGTGT GGTGGATGCC ACTACAACAC GGGCAAGCAA CAGGCGATGT TCGAAACGTC CTTTGAAGGC ACACGCTGTA CCAACCGCGG GTGCTACGAG AAGAAGACGG AAGCTGAGTT GGAAAGCCGC CGGCTGGCGC TGATTGGTGA CTACCAGGTG GTGCGTATCG TGCGTCCCGG GGACAACATG ACGGTCGTGC CGCTACGTGC AGATGGTGCA AAGGGTGTTG GAAAAGGACA GGCGCTGGCT TGCCGCACTT GCGGTGACTT TGGCGCTTGC ATCTCTGCAG CACCGGACAA ACTGGGCATG TCGTTCAAGG ATGTGTGTTT CAACTCGACC TGCAATGCAG AGAAGGTGGA TGCGCGTGTC AAGGCTGAAC AGCAAGCAGA AGCGGCCGCA AGGGCCCCGG AAACTGCAGG AGCAACAGGA TCTGCGGATG CAAAGGAGGC AACTCCCGCG CCCAAGGGCA CTGGCGGCAC CAAGCAGGCC AAAGCACCTA CCAAGGCGCC AAGTTCTGAA CCGCGTAACG CGGTGAAGGA ATACCGCGAA TCGGTATGGC GTAAGGTCTT CCACCGTGCT GCGTTGCGTC TTCCCGTAGC CCAGAGCCGT GCGCTGCTGA TTGCCTTGTG CCTTCACAGC CCGCGTACGC TCTCGCACGA CGATGCAACC AAGGCCGTGG GCAAAGTGAT CGGTAACGAT GATCTGTCCT CGCAGGAAGC TGGTGAGCTG TTGGGTTCAC TCCTGAAGCT GGACCAGAAA GGCCTGGGCG ACTCGTTGCA ACAGATTCCG GCCTTCGTCG GTAGCGATCT GAGCATCAAA GCGATTTCCG AACTGATGTC CGCATTGGAC ATCAAGATCG AGCATCACTG GAAGGTCAAT GAAGCCTTCT TTGACCTGCT GACCAAGACC GAGGTGGATG CCGTGTGCAT TGAACTCGGG CTGGACAAGG CAATTGGGAA GGAATATCCC AAGCTGAAAG TAGGAGGAAA GGCTGAGTAC ATCAAGGCCC TCCTCGCCAT TGAAGGTTAC GACTACGTTG GGAAGATTCC TGCGCTCATG CGCTGGTAA
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Protein sequence | MEQTQTPIRT FPQKGFNYRR RFNQAAMDEL VEDIQRQGIL QSILVRGSDP AEQSELPRLI KLSDIKAGKY QVISGNRRVH AVEIALGEEA EVPALVRMMT DAEAMAAMVS ENKVREDTTA IEDAEAAMRM LGLLNGDREE AAKRLGWSPQ VLNSRLGIMN ATDKVRDAYI DEKILLGHVE ILAALIKDVQ DGVLEKMLAR PKLPTVAELK AMAEQILLNL DAAIFDKAEC GGCHYNTGKQ QAMFETSFEG TRCTNRGCYE KKTEAELESR RLALIGDYQV VRIVRPGDNM TVVPLRADGA KGVGKGQALA CRTCGDFGAC ISAAPDKLGM SFKDVCFNST CNAEKVDARV KAEQQAEAAA RAPETAGATG SADAKEATPA PKGTGGTKQA KAPTKAPSSE PRNAVKEYRE SVWRKVFHRA ALRLPVAQSR ALLIALCLHS PRTLSHDDAT KAVGKVIGND DLSSQEAGEL LGSLLKLDQK GLGDSLQQIP AFVGSDLSIK AISELMSALD IKIEHHWKVN EAFFDLLTKT EVDAVCIELG LDKAIGKEYP KLKVGGKAEY IKALLAIEGY DYVGKIPALM RW
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