Gene Bpro_5020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5020 
Symbol 
ID4015933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007949 
Strand
Start bp118289 
End bp119551 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content53% 
IMG OID637944658 
Producthistidine kinase 
Protein accessionYP_551790 
Protein GI91790839 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.871179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTGC TGCGCGAGGA GCTGATAGTC GCGCCCATTG AGCCTATTTT GCATCTCTCG 
CCAATGCGCA TGAAAGCTGC TGGCCTCTGT TTCTTAGTGG GCCACGCCCT GTTTTCCTGG
ATCTGGTCGG TCTGGTTGCC GCAACCCTAT GAAAATCTGG CACTTCGCGT GCTGGCCAGC
TTGCTCGGGC TGAGTCTGAT TTTGGTGACC TACTGGGTTC GTCATGAGCC CAACAGTCAA
CTACCCAACA AAGTCTTCAG CGCTGTCTAT TGGCTTAACT TACCGGTCCT CTTCACTTGG
ATGTACCTGT GCAATAGTGG CAGCACGATG TGGCTGGGAA CCATGGCTGT CATGGTGGTA
GCTTATTACC AGCTAACGGA CTGGCGGTTG GCGAGCGTAG GCACGATCAC AGGAATTCTT
TTTGCTTCTT CACTGTTTGT CATCATTGCC CCTGAAGTCC AGGCCGTCCC GGAACAGCAA
GGGAAAATCA ACGCAGTGGT TTTCGCATTC GCATGGTTTA TTGGACTTGC CTTAAGTCTG
TCCTCAGCGA ATCTACGGCG CGCTCATATC AAAAGCACAA TGACCACGAT GGGCATCATG
GCCCATGAAC TGCGCACACC ACTTTCAGCC GCCAATCTTC TGGGCGATGC CATTCAAATG
GTTGTTGACC GTCGTCCCGA CCACCCGTCT GCTCCCCAGT TGGTGAAACT TGGGGGACGC
TTGCAGTCCC TGGTTCGGAC CATGAACCAT CAGATCGACA TGCAAATCGC CAATGCCAGG
CTGCTTCAGC TGCCCGCCAA TTTAGAGCTG GTGGATGCCG CAACGGTGGT CAGCAATGCT
GTCGCGGCTT ATCCGTACCC ATCTGAGCGC GAAAAGCGGT GCGTAAAAGT TACCGTTTCT
GAGAAGTTTG TCTTTCGGTC ATCTACCACC CAGTTTTCGC AAGTTCTGGA CAATCTGATC
AAAAATGCGC TGCGTTCTTT GATGGCCACT GACTCCGAGT ACCAGGAAGG CGCGCTGTCT
ATCGAAGTCA TGAGGCAAGG CAAGCGCGGT CACTTAGTGG TCACAGACTT GGGCGGCGGC
ATTGATCCAG CGCTTTTGCC GCATATTTTT AAACCCTTCT TCTCAACCCA CGCCGGCACG
GGACATGGCC TGGGTCTGAC CTTCTGCAAG CAGGTGGTTG AGCGAGCTGG AGGCACTATT
TCCGTCAAGT CTCAAATTGC CCACGGTGCA TCTTTTATGA TTGAGCTACC TGTCGAGGAA
TAA
 
Protein sequence
MQVLREELIV APIEPILHLS PMRMKAAGLC FLVGHALFSW IWSVWLPQPY ENLALRVLAS 
LLGLSLILVT YWVRHEPNSQ LPNKVFSAVY WLNLPVLFTW MYLCNSGSTM WLGTMAVMVV
AYYQLTDWRL ASVGTITGIL FASSLFVIIA PEVQAVPEQQ GKINAVVFAF AWFIGLALSL
SSANLRRAHI KSTMTTMGIM AHELRTPLSA ANLLGDAIQM VVDRRPDHPS APQLVKLGGR
LQSLVRTMNH QIDMQIANAR LLQLPANLEL VDAATVVSNA VAAYPYPSER EKRCVKVTVS
EKFVFRSSTT QFSQVLDNLI KNALRSLMAT DSEYQEGALS IEVMRQGKRG HLVVTDLGGG
IDPALLPHIF KPFFSTHAGT GHGLGLTFCK QVVERAGGTI SVKSQIAHGA SFMIELPVEE